Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1669 ATGGTGAAGTCGAATGTGGAAAAACCTACGACAGAACGAAGTGATTCATCATTGTACCGTGGAGTACGGAAGAGGAAGTGGGGGAAATATGTGTCGGAGATTAGATTACCAAACAGCCGTCAGAGAATATGGTTAGGTTCTTATGATTCTGCCGAGAAGGCGGCGCGTGCTTTCGACGCGGCGATGTTTTGCTTACGTGGCAGTGGTGCTAAGTTTAACTTCCCTAATGATCCACCAAACATTGCTGGAGGAAGAACAATGACTCCTTCTGAGATTCAAGCTGCTGCAGCCCGTTTTGCTAATTCGGGTGTCCATATTGAGAATTCGGGTCAACCCGGTAATGTTGCGGTGGAGTATGAGTCGTCGTCGGAGGGGACTGCATTGTTGGCTATGGAATCTGAAGCACTGTCTCCGGCAATGTCAGATGCAACGGTTCAGACAGATTATGATTCAAAGCAAAACGGGTTGTTTTCCGATTTGTTTGCGGTTGATGGGTCGGGGAGATTTGAACCGGATTACTCGGTTTTTCCCGGTTTTGATGATTTTGGTGGTAATTTTTATGTGCCGGACATGCCAATTTATGATTATGGAGAAGAGAACTTGGATGGGTTGGTGATTCATGACTCCTTTTTGTGGAACTTCTAA 645 0.4605 MVKSNVEKPTTERSDSSLYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPNDPPNIAGGRTMTPSEIQAAAARFANSGVHIENSGQPGNVAVEYESSSEGTALLAMESEALSPAMSDATVQTDYDSKQNGLFSDLFAVDGSGRFEPDYSVFPGFDDFGGNFYVPDMPIYDYGEENLDGLVIHDSFLWNF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1669 214 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 3 214 - -
Mtr2g1669 214 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 214 - -
Mtr2g1669 214 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Mtr2g1669 214 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Mtr2g1669 214 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1669 Mtr-Chr2 18848743 18849747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1669 17 214 AP2-EREBP Transcription Factor Family AT1G19210 48.276 6.51e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr2g1669 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1669 - - mtr:MTR_2g043040 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1669 2 18848743 18849747 Mtr2g1669 2 18848743 18849747 ECH