Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1668 ATGGTGAAATCGAATATGGAAAAAATTGCGGTGGAAAGAAGTGATTCTTCATTGTATAGAGGAGTAAGGAAGAGAAAGTGGGGGAAATATGTGTCAGAAATCAGGCTGCCAAACAGCCGCCAGAGAATATGGTTAGGTTCCTATGACTCCGACGTGAAGGCGGCACGTGCATTCGACGCAGCTATGTTTTGCTTACGTGGCAGTGGTGCTAAGTTTAATTTTCCTAATGATCCTCCGGAGATTGCCGGAGGAAGGTCCATGACACATTCTGAGATTAAGACCGCGGCAGCCCGTTTTGCCAATTCGGGTCAAGTCAATAATGAGTATTCGGGGCAACCCGATAATTCTACGATCGAAACACCGTCTTGGTCACAGGGAACGACATTCCTGCCAATGGATGGTGTTTCAACATGTTATACTCAGGTTGAAACACCATCTTTATTGGAGGGGACGACAACAACATTGTTGTCGTCTCCTGCTCTATCTGATGTGACGGTTCAAACCGATAGTGATTTAGGAGAAAACGGGTTGTGTAAGGACTTGTTTTCAGAAACCGGGTTGGGTTACACTATGTTTCCGGGTTTTTATGATTTTTGTGGCGATTTTTATGTGCCGGAGTTGACAAATTTTGCTTATGAAGAAGAGAACATGGATGGGTTGATAATACAAGATTCATTCTTATGGAATTTCTAA 693 0.4358 MVKSNMEKIAVERSDSSLYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSDVKAARAFDAAMFCLRGSGAKFNFPNDPPEIAGGRSMTHSEIKTAAARFANSGQVNNEYSGQPDNSTIETPSWSQGTTFLPMDGVSTCYTQVETPSLLEGTTTTLLSSPALSDVTVQTDSDLGENGLCKDLFSETGLGYTMFPGFYDFCGDFYVPELTNFAYEEENMDGLIIQDSFLWNF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1668 230 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Mtr2g1668 230 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 230 - -
Mtr2g1668 230 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Mtr2g1668 230 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Mtr2g1668 230 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1668 Mtr-Chr2 18841245 18842280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1668 17 104 AP2-EREBP Transcription Factor Family AT1G19210 73.864 1.93e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g1668 AP2 4.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1668 - - mtr:MTR_2g043040 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1668 2 18841245 18842280 Mtr2g1668 2 18841245 18842280 ECH