Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1663 ATGTCTACCTCATCGGAATATTCAGAAGTTTCCGGCAACAAACCACCGGCGAAGTCACCGGAGAAAACAACTTTCTCTCAAACATGTAGTTTATTGAGTCAATATATTAAGGAAAAGGGTTGCTTCAAAGATCTTTCTCTTGGTATCACATGCAACAACAACAACACAGACCCTTCTGGTTCTTCTGAGACTTCTTCTCAATCTGCAACAACCATGAACTTGTTTCCAACCATGGAAAACAATTTGTCACAAAAGAACCTTACAACTATGGATTTGCTCACTCCACAAGCTGCTTTGAACAATTCCAATGCTATCAAGGGACCTAAAGCTGCACAATTGACAATGTTTTATAACGGTCAAGTTATTGTATTCGATGATTTTCCTGCCGATAAAGCACAGGAGCTCATGGCTTTTGCTAACAAAGGAATCTCTCAAAGTCAGAACAATTCTGTGTACACTTACACACAGAGCCAGCCTTCATTTCCTCCTAATTTGGTCAGAACTTCGGTTAACACAACCACTCCGATTGTTCCTACCGTGAACATCATCCCTAGTACTGCCACCGGCACCGGCTCGATGAATGAGCACCTTCAAGTGCCTTCCAGACCTAATCTTTGCGATCTCCCAATTATGAGGAAAGCTTCGCTTCATCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTGCCAATGCACCATATCAAATTAATAAGCCAGCTGAATCCATGTCATGGCTTGTGGGTGCAAAATCAACTCAAATTTGA 762 0.4186 MSTSSEYSEVSGNKPPAKSPEKTTFSQTCSLLSQYIKEKGCFKDLSLGITCNNNNTDPSGSSETSSQSATTMNLFPTMENNLSQKNLTTMDLLTPQAALNNSNAIKGPKAAQLTMFYNGQVIVFDDFPADKAQELMAFANKGISQSQNNSVYTYTQSQPSFPPNLVRTSVNTTTPIVPTVNIIPSTATGTGSMNEHLQVPSRPNLCDLPIMRKASLHRFLEKRKDRIAANAPYQINKPAESMSWLVGAKSTQI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1663 253 Pfam Jas motif 209 234 IPR018467 -
Mtr2g1663 253 SMART tify_2 106 141 IPR010399 -
Mtr2g1663 253 Pfam tify domain 108 140 IPR010399 -
Mtr2g1663 253 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 245 IPR040390 -
Mtr2g1663 253 ProSiteProfiles Tify domain profile. 106 141 IPR010399 -
Mtr2g1663 253 MobiDBLite consensus disorder prediction 1 23 - -
Mtr2g1663 253 PANTHER PROTEIN TIFY 10A 18 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1663 Mtr-Chr2 18792499 18794956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1663 1 245 Tify Gene Family AT1G19180 36.630 3.14e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr2g1663 tify 7.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1663 K13464 - gmx:100801449 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4590 4 59958396 59960114 Mtr2g1663 2 18792499 18794956 PCT