Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1645 ATGGCATCATCTGATTCCAACGCTACCAACATGCTTCAAGCAATTCGCTACAACCGTGGGTCTCTTCAGCTTCTCGATCAGACAAAGCTTCCTTTAGAAAGCGTTTACTTGGAAATTCGTGATTCTAATGATGGCTGGAATGCTATACGAGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATTGCAGCGGCACTTTCGCTGGCTGTGGAGGTGTCCAATTTAGATGATTTTAATGGTTCTACTGATGATGCTGTTTACTTCCTGCAGAAGAAGTTGGACTATCTTGTCTCGAGTCGGCCAACCGCGGTGAACTTATCAGACGCTGCGACCAAACTCAAAGAAATCATATCTAAGGCTGCTGCTACCACTTCAGAGGCCAAGGGCGTGTTTCAGGCATATCTAGAGGCTGCTGAAATAATGCTTGAGGATGATGTTGCATCAAACAGAGCAATTGGAACTTATGGAGCTAGTTTTATTCAAAACCAAACAGAAAAACTGAAGCTTTCTGTTTTGACCCATTGCAATACTGGAAGTTTAGCTACAGCTGGATATGGTACTGCTCTTGGTGTAATTCGTGCACTTTACAGCGGGGGAGTTTTAGAAAGGGCTTACTGCACAGAAACACGCCCCTTCAATCAAGGATCCAGACTTACTGCCTATGAGTTGGTACATGACAAAATACCAGCAACTCTTATTGCAGATTCTGCTGCAGCTGCATTAATGCAAGCAGGGCGTGTGGATGCTGTTGTTGTTGGCGCAGATCGTGTCGCATCAAATGGTGACACAGCAAACAAAATTGGAACCTATAGTGTTGCCTTATGCGCCAAGTTTCATAATGTACCTTTTTTTGTGGCTGCCCCCTTGACTTCCATCGATCTATCACTTTCTTCTGGACAACAAATTGTCATTGAAGAGAGATCTCCCAAGGAGTTGTTGAACATGCGTGGAGGACTTGGAGAGCAGGTTGCTGCCTCAGGAATATCTGTGTGGAATCCGGCTTTTGATGTTACACCTGCTAATCTAATATCTGGGATCATCACTGAGAAGGGTGTCATTACAAAGACGCCTGCTGGCGATGCTTTTGACATAAAAGCTTTCGTACAGAAAACAGGTTAA 1119 0.4477 MASSDSNATNMLQAIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALSLAVEVSNLDDFNGSTDDAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEAKGVFQAYLEAAEIMLEDDVASNRAIGTYGASFIQNQTEKLKLSVLTHCNTGSLATAGYGTALGVIRALYSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFFVAAPLTSIDLSLSSGQQIVIEERSPKELLNMRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTPAGDAFDIKAFVQKTG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1645 372 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 355 IPR005251 -
Mtr2g1645 372 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 12 364 IPR005251 -
Mtr2g1645 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 10 369 - -
Mtr2g1645 372 Gene3D - 10 201 IPR027363 -
Mtr2g1645 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 10 369 - -
Mtr2g1645 372 SUPERFAMILY NagB/RpiA/CoA transferase-like 9 356 IPR037171 -
Mtr2g1645 372 Pfam Initiation factor 2 subunit family 54 354 IPR000649 GO:0044237
Mtr2g1645 372 Gene3D - 202 366 IPR042529 -
Mtr2g1645 372 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 40 355 IPR011559 GO:0044249
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1645 51 370 Eukaryotic Initiation Factors Gene Family AT2G05830 76.324 1.17e-170 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1645 K08963 - gmx:100799311 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1645 2 18635123 18639026 Mtr2g1645 2 18635123 18639026 ECH