Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1644 ATGCAGAAGAATGTGAAGAAATCGCCGTTACCGTTGATCGAAACCAGCGGGAACAAGAAGAAATTGGAATTGTGTAGCAAGGAATCGCTTGTGAAGGTTCTTAGATGGCATTTTGGGTATCCTGATTTTAGGGGTTTGCAATTGGAAGCTATTCAAGCTGTGCTTTCAGGAAGAGATTGTTTTTGTCTTATGCCAACAGGAGGAGGCAAGTCAATGTGTTATCAGATCCCTGCATTGGCAAAAGAAGGAATCGTGCTTGTAGTTTGTCCTTTAATAGCCTTAATGGAAAACCAAGTGATGGCACTAAAGGAGAAAGGAATTGCTGCAGAGTTTCTCTCCTCAACTAAAACAGCAAAAGCAAAAGATAAGATTCACGAGGACCTTGGTTCTGGAAAACCGTCTACAAGGCTGCTATATGTTACTCCAGAGTTGATAGCAACCCCAGGGTTTATGTCAAAGCTGACAAAGATTCATTCCAGGGGGTTGCTAAGTCTCATTGCCATTGATGAGGCACATTGCATCTCTTCCTGGGGTCATGATTTCAGACCTACCTACCGTAAGCTTTCAACTCTGAGAAGCCACCTACCAGATGTACCAATATTAGCTCTAACCGCTACCGCTGTTCCTAAGGTTCAGAAGGATGTAGTGGAATCATTGCACATGCAAAATGCATTAATACTGAAGACTTCTTTTAATCGTCCTAATATATATTATGAAGTTAGGTACAAAGATCTATTGGACGATTCTTATTCTGATTTATCTGATAGACTCAAATCTATGGGCGATGTTTGTGCGATAATTTACTGCCTTGAACGTTCCATGTGTGATGACTTGTCAGCTCATCTATCCCAAAGAGGCATTTCTTGTGCTGCTTATCATGCAGGACTGAATAATAAAATGCGAACTTCTGTGCTACATGATTGGATATCTTCAAAAACAAAAGTTGTTGTTGCCACTGTTGCTTTTGGGATGGGCATCGATAGAAAGGATGTGAGAATTGTGTGCCACTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCCGGCAGAGCTGGTCGTGATCAATTGCCCTCTACAAGTCTGTTGTACTATGGAGTAGATGATCGCAGAAGAATGGAATTTATATTACGCAACTCAGGTAACAAGAAGTCACAATCATCAAGTTCACAAGAAGAATCAACCAGAATGTCCCTGACTGCTTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAATAATTCTTGAGAGTTTTGGGGAGCAGGTAACAACATCATTATGTGGAAAAACATGTGACTCCTGTAGACACCCAAACTTAGTTGCCAGAAATTTGGAGGATCTCACAGCTGCTTGTTCTCTACGTCAGAGAGGTGGTTCTCGAGTTTTCATTACCAGTTCCACTGATGCAATTGATGGAGGACAGTTATCTGAATTCTGGAATCGAGATGAGGAAGCAAGTGGGTCAGAGGAAGATATTTCCGACATAGATGACGGTAATGAGGCTGTCAGCAATCTAGCCCGGTCAAAGGTTCAATCCAGACTGGGAGTAAATGAAAAGCTTGATTTGTTACAGAGGGCAGAAGAGAAGTACTATCAAAGCGAGAGCACTAATAAACAGAGAAACAAAGTTGACAAGAATGCTATTTCTGATGCATTGCGAGAGGCAAGCAGGCAGAGATTACAAAATGCTTTAAAAGAGGCTCAGCAACGGATTGACGACTTTAAGATTGAAACGGAGACCTCGGCATCTCTTCTCGAAGATGAATGCTACAAGAAATATGGCAAGACTGGCAAATCATTCTATTATTCCAAAGTTGCAAGTACTATCAGGTGGTTGAAAACTACAAGTTCTGTCGATCTGATGAACCGACTTAGTGAAATTGATGCTTCCTCATCACCGAGTGTCTTCTTTGAAGCCGAGCATCCTCTCACGCCACTACCTGCTTCAGATCCTTGTGCAAATGAAGAAACTGGCAATGAGCTCTCAGAAAATGCTATAACAGAAACAATCCCATGTGATATACCAATAGAAAGTTCTTTTAATACAAACTTACCGCCAATACCATCCTTTGCTGAATTTGTAAATAGTAAGAAAGAGAAAAGAGATCGATCAAGTGACACAAAGAAACACTCATCAAGAGTAGAAAAGAAGACGAGGATACAGTAG 2184 0.4103 MQKNVKKSPLPLIETSGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSGNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTTSLCGKTCDSCRHPNLVARNLEDLTAACSLRQRGGSRVFITSSTDAIDGGQLSEFWNRDEEASGSEEDISDIDDGNEAVSNLARSKVQSRLGVNEKLDLLQRAEEKYYQSESTNKQRNKVDKNAISDALREASRQRLQNALKEAQQRIDDFKIETETSASLLEDECYKKYGKTGKSFYYSKVASTIRWLKTTSSVDLMNRLSEIDASSSPSVFFEAEHPLTPLPASDPCANEETGNELSENAITETIPCDIPIESSFNTNLPPIPSFAEFVNSKKEKRDRSSDTKKHSSRVEKKTRIQ* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1644 727 CDD DEXHc_RecQ 32 232 - -
Mtr2g1644 727 MobiDBLite consensus disorder prediction 688 727 - -
Mtr2g1644 727 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 32 445 IPR004589 GO:0004386|GO:0006310
Mtr2g1644 727 Pfam DEAD/DEAH box helicase 46 212 IPR011545 GO:0003676|GO:0005524
Mtr2g1644 727 Pfam RecQ zinc-binding 370 441 IPR032284 -
Mtr2g1644 727 Pfam Helicase conserved C-terminal domain 263 355 IPR001650 -
Mtr2g1644 727 SMART helicmild6 276 357 IPR001650 -
Mtr2g1644 727 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 245 397 IPR001650 -
Mtr2g1644 727 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 51 225 IPR014001 -
Mtr2g1644 727 PANTHER DNA HELICASE RECQ FAMILY MEMBER 7 711 - -
Mtr2g1644 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 378 IPR027417 -
Mtr2g1644 727 SMART ultradead3 39 241 IPR014001 -
Mtr2g1644 727 Gene3D - 233 459 IPR027417 -
Mtr2g1644 727 CDD SF2_C_RecQ 233 366 - -
Mtr2g1644 727 Coils Coil 563 583 - -
Mtr2g1644 727 MobiDBLite consensus disorder prediction 700 727 - -
Mtr2g1644 727 Gene3D - 10 232 IPR027417 -
Mtr2g1644 727 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 7 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1644 Mtr-Chr2 18624229 18633912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1644 33 370 Eukaryotic Initiation Factors Gene Family AT3G19760 22.346 8.89e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1644 - K10901 gmx:100819601 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1644 2 18624229 18633912 Mtr2g1644 2 18624229 18633912 ECH