Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g1644 | ATGCAGAAGAATGTGAAGAAATCGCCGTTACCGTTGATCGAAACCAGCGGGAACAAGAAGAAATTGGAATTGTGTAGCAAGGAATCGCTTGTGAAGGTTCTTAGATGGCATTTTGGGTATCCTGATTTTAGGGGTTTGCAATTGGAAGCTATTCAAGCTGTGCTTTCAGGAAGAGATTGTTTTTGTCTTATGCCAACAGGAGGAGGCAAGTCAATGTGTTATCAGATCCCTGCATTGGCAAAAGAAGGAATCGTGCTTGTAGTTTGTCCTTTAATAGCCTTAATGGAAAACCAAGTGATGGCACTAAAGGAGAAAGGAATTGCTGCAGAGTTTCTCTCCTCAACTAAAACAGCAAAAGCAAAAGATAAGATTCACGAGGACCTTGGTTCTGGAAAACCGTCTACAAGGCTGCTATATGTTACTCCAGAGTTGATAGCAACCCCAGGGTTTATGTCAAAGCTGACAAAGATTCATTCCAGGGGGTTGCTAAGTCTCATTGCCATTGATGAGGCACATTGCATCTCTTCCTGGGGTCATGATTTCAGACCTACCTACCGTAAGCTTTCAACTCTGAGAAGCCACCTACCAGATGTACCAATATTAGCTCTAACCGCTACCGCTGTTCCTAAGGTTCAGAAGGATGTAGTGGAATCATTGCACATGCAAAATGCATTAATACTGAAGACTTCTTTTAATCGTCCTAATATATATTATGAAGTTAGGTACAAAGATCTATTGGACGATTCTTATTCTGATTTATCTGATAGACTCAAATCTATGGGCGATGTTTGTGCGATAATTTACTGCCTTGAACGTTCCATGTGTGATGACTTGTCAGCTCATCTATCCCAAAGAGGCATTTCTTGTGCTGCTTATCATGCAGGACTGAATAATAAAATGCGAACTTCTGTGCTACATGATTGGATATCTTCAAAAACAAAAGTTGTTGTTGCCACTGTTGCTTTTGGGATGGGCATCGATAGAAAGGATGTGAGAATTGTGTGCCACTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCCGGCAGAGCTGGTCGTGATCAATTGCCCTCTACAAGTCTGTTGTACTATGGAGTAGATGATCGCAGAAGAATGGAATTTATATTACGCAACTCAGGTAACAAGAAGTCACAATCATCAAGTTCACAAGAAGAATCAACCAGAATGTCCCTGACTGCTTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAATAATTCTTGAGAGTTTTGGGGAGCAGGTAACAACATCATTATGTGGAAAAACATGTGACTCCTGTAGACACCCAAACTTAGTTGCCAGAAATTTGGAGGATCTCACAGCTGCTTGTTCTCTACGTCAGAGAGGTGGTTCTCGAGTTTTCATTACCAGTTCCACTGATGCAATTGATGGAGGACAGTTATCTGAATTCTGGAATCGAGATGAGGAAGCAAGTGGGTCAGAGGAAGATATTTCCGACATAGATGACGGTAATGAGGCTGTCAGCAATCTAGCCCGGTCAAAGGTTCAATCCAGACTGGGAGTAAATGAAAAGCTTGATTTGTTACAGAGGGCAGAAGAGAAGTACTATCAAAGCGAGAGCACTAATAAACAGAGAAACAAAGTTGACAAGAATGCTATTTCTGATGCATTGCGAGAGGCAAGCAGGCAGAGATTACAAAATGCTTTAAAAGAGGCTCAGCAACGGATTGACGACTTTAAGATTGAAACGGAGACCTCGGCATCTCTTCTCGAAGATGAATGCTACAAGAAATATGGCAAGACTGGCAAATCATTCTATTATTCCAAAGTTGCAAGTACTATCAGGTGGTTGAAAACTACAAGTTCTGTCGATCTGATGAACCGACTTAGTGAAATTGATGCTTCCTCATCACCGAGTGTCTTCTTTGAAGCCGAGCATCCTCTCACGCCACTACCTGCTTCAGATCCTTGTGCAAATGAAGAAACTGGCAATGAGCTCTCAGAAAATGCTATAACAGAAACAATCCCATGTGATATACCAATAGAAAGTTCTTTTAATACAAACTTACCGCCAATACCATCCTTTGCTGAATTTGTAAATAGTAAGAAAGAGAAAAGAGATCGATCAAGTGACACAAAGAAACACTCATCAAGAGTAGAAAAGAAGACGAGGATACAGTAG | 2184 | 0.4103 | MQKNVKKSPLPLIETSGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSGNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTTSLCGKTCDSCRHPNLVARNLEDLTAACSLRQRGGSRVFITSSTDAIDGGQLSEFWNRDEEASGSEEDISDIDDGNEAVSNLARSKVQSRLGVNEKLDLLQRAEEKYYQSESTNKQRNKVDKNAISDALREASRQRLQNALKEAQQRIDDFKIETETSASLLEDECYKKYGKTGKSFYYSKVASTIRWLKTTSSVDLMNRLSEIDASSSPSVFFEAEHPLTPLPASDPCANEETGNELSENAITETIPCDIPIESSFNTNLPPIPSFAEFVNSKKEKRDRSSDTKKHSSRVEKKTRIQ* | 728 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g1644 | 727 | CDD | DEXHc_RecQ | 32 | 232 | - | - | |
Mtr2g1644 | 727 | MobiDBLite | consensus disorder prediction | 688 | 727 | - | - | |
Mtr2g1644 | 727 | TIGRFAM | recQ_fam: ATP-dependent DNA helicase, RecQ family | 32 | 445 | IPR004589 | GO:0004386|GO:0006310 | |
Mtr2g1644 | 727 | Pfam | DEAD/DEAH box helicase | 46 | 212 | IPR011545 | GO:0003676|GO:0005524 | |
Mtr2g1644 | 727 | Pfam | RecQ zinc-binding | 370 | 441 | IPR032284 | - | |
Mtr2g1644 | 727 | Pfam | Helicase conserved C-terminal domain | 263 | 355 | IPR001650 | - | |
Mtr2g1644 | 727 | SMART | helicmild6 | 276 | 357 | IPR001650 | - | |
Mtr2g1644 | 727 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 245 | 397 | IPR001650 | - | |
Mtr2g1644 | 727 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 51 | 225 | IPR014001 | - | |
Mtr2g1644 | 727 | PANTHER | DNA HELICASE RECQ FAMILY MEMBER | 7 | 711 | - | - | |
Mtr2g1644 | 727 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 378 | IPR027417 | - | |
Mtr2g1644 | 727 | SMART | ultradead3 | 39 | 241 | IPR014001 | - | |
Mtr2g1644 | 727 | Gene3D | - | 233 | 459 | IPR027417 | - | |
Mtr2g1644 | 727 | CDD | SF2_C_RecQ | 233 | 366 | - | - | |
Mtr2g1644 | 727 | Coils | Coil | 563 | 583 | - | - | |
Mtr2g1644 | 727 | MobiDBLite | consensus disorder prediction | 700 | 727 | - | - | |
Mtr2g1644 | 727 | Gene3D | - | 10 | 232 | IPR027417 | - | |
Mtr2g1644 | 727 | PANTHER | ATP-DEPENDENT DNA HELICASE Q-LIKE 3 | 7 | 711 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g1644 | Mtr-Chr2 | 18624229 | 18633912 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g1644 | 33 | 370 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 22.346 | 8.89e-14 | 72.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g1644 | - | K10901 | gmx:100819601 | 1098.96 |