Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1640 ATGATCTCGAATAAGAAAAATCCAACTCCGGTTGGATATTTCTTCCGATTACTCAAAATGAATGCGCCCGAGTGGCCTTACTCGATAATGGGAGCCGTTGGATTTGTTCTTTCTGGATTCATTGGTCCAACTTTTGCTATTGTTATGAGCAATATGATTGAGGTGTTTTACTATAGAAACTATGCATCCATGGAGAAGAAAACTAAGGAATATGTTTTCGTATACATCGGTGCTGGAATTTTTGTTGTTGGTGCTTACTTGATACAACATTACTTTTTTAGTATCATGGGAGAAAATCTCACCACAAGGGTTAGAAGAATGATGCTTGCAGGTCCAGCAGCTGATGCTGCTGTCTGCGCCAGTCCAAGCAAAGGTTTAGGGAGGTTTTTTGGGTTCCTGGTAGTCCGGTTTGAGGCAAGGCTATGGCTCTGA 432 0.4167 MISNKKNPTPVGYFFRLLKMNAPEWPYSIMGAVGFVLSGFIGPTFAIVMSNMIEVFYYRNYASMEKKTKEYVFVYIGAGIFVVGAYLIQHYFFSIMGENLTTRVRRMMLAGPAADAAVCASPSKGLGRFFGFLVVRFEARLWL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1640 143 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 29 110 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1640 143 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 10 110 - -
Mtr2g1640 143 SUPERFAMILY ABC transporter transmembrane region 16 109 IPR036640 GO:0005524|GO:0016021
Mtr2g1640 143 Gene3D ABC transporter type 1, transmembrane domain 2 111 IPR036640 GO:0005524|GO:0016021
Mtr2g1640 143 Pfam ABC transporter transmembrane region 29 109 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g1640 143 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 110 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1640 Mtr-Chr2 18564038 18565699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1640 14 111 Calmodulin-binding Proteins AT2G36910 40.816 9.38e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1640 K05658 - mtr:MTR_2g042310 281.182