Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1622 ATGAACAAGAACAAGTTTCCTTTTACTCCTTCACAATGGCAAGAACTTGAACATCAAGCTCTTATTTACAAGTACATGGCTTCTGGTATATCTATTCCACCTGATCTTCTTTTTACCATAAGAAAAAGCTATTTGGATTCTCCTCTTTCTTCAAGACTTTTTCCTAGTCAACAACACCAACACTTTGGATGGAACTATCTGCAAATGGGTTTAGGAAGAAAAATAGATCCAGAGCCAGGTAGATGTAGAAGAACAGATGGAAAAAAATGGAGATGCTCAAAAGAAGCATATCCAGATTCTAAATACTGTGAAAGACACATGCATAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTGTTAAAACAGCAACAACAAATACAAATAATATTAATAATGCTTCATCACTTACCAAAAATAGCCCTGCATCATTAACTAATTCTTCTTCTTCTTTGTCTTTTGAGACACAACAACATCACCAAAACTATCCTCAAAATTCTTGCTATGCTTCTAATTTGCAACAGTCCTTTATGTATCCTCATACAACTTCAAGGTCAACTTTGTCATCTGGTATTGGTTTGTCTTTTGAAGACAATAGTGCTCCCTTGTTTCTTGACAGTAACACTTGCTCTCAGAATAACACTGATTACAGGTATGTGTATGGACAAAAAGAAGAGGTTGATGAGTATGCATTCTTCAAAGAACCTTCTGGTAGCAGTACTATGAAAAGCTTCTCTACTTCATCAATGGAACATGATCCTTGGCAACTAACACCACTTACTATGAGTTCTTCCTCATCATCTTCTACTTCTTTGAGACAGAGGAGCTATTCGGCGTTGTCCAATGATTACTCTTGCTTGCAACTTCAGAGCCTTAGTGAACACTCAAAGCAAGATGAACCTCAGAAAACTGTTCATCGCTTCTTTGATGAATGGCCACATAAAGGGAGAGATCAATGGCTTGATTTGGATGATAAATCATCTACTACTCAATTATCAATTTCTATTCCATCCTCTACTCATAATTTTCCAACTTTCACTTCAAGAAATCACCATGATGGTTGA 1065 0.3653 MNKNKFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLFPSQQHQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVVKTATTNTNNINNASSLTKNSPASLTNSSSSLSFETQQHHQNYPQNSCYASNLQQSFMYPHTTSRSTLSSGIGLSFEDNSAPLFLDSNTCSQNNTDYRYVYGQKEEVDEYAFFKEPSGSSTMKSFSTSSMEHDPWQLTPLTMSSSSSSSTSLRQRSYSALSNDYSCLQLQSLSEHSKQDEPQKTVHRFFDEWPHKGRDQWLDLDDKSSTTQLSISIPSSTHNFPTFTSRNHHDG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1622 354 MobiDBLite consensus disorder prediction 334 354 - -
Mtr2g1622 354 PANTHER - 2 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mtr2g1622 354 ProSiteProfiles QLQ domain profile. 7 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr2g1622 354 Pfam QLQ 7 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr2g1622 354 SMART QLQ_2 6 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr2g1622 354 Pfam WRC 77 119 IPR014977 -
Mtr2g1622 354 MobiDBLite consensus disorder prediction 125 157 - -
Mtr2g1622 354 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Mtr2g1622 354 PANTHER GROWTH-REGULATING FACTOR 5 2 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1622 Mtr-Chr2 18299032 18301795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1622 7 119 GRF Transcription Factor Family AT3G13960 71.681 2.20e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mtr2g1622 WRC 7.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1622 - - gmx:100781613 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4617 4 60177188 60179646 Mtr2g1622 2 18299032 18301795 PCT