Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1605 ATGGCTATGCAATCACCTTCCTCCTCTTCCTCCTTATCTTATGGTTTCAGCTTCGATGTGTTCATTAGTTTCAGGGGTACCGATACTCGATATGGTTTCACCGGTAATCTCTATAAAGCTCTTTCTGACAAGGGAATTCGAACCTTCATCGATGACAAAGAGCTTCAGAGAGGTGATGAAATCACACCGTCGCTCCTCAAGAGCATTGAAGACTCAAGAATTGCGATTATCGTCTTCTCAAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCAATGCTCCAATGAAAAGGGTACGACGGTAATTCCTGTTTTCTATGGCACAGAACCTTCTCAGGTGCGACATCAGAATGATAGTTATGGTGAAGCACTTGCTAAGCATGAAGAGGGTTTTCAAAATAGCAAGGAAAACATGGAGCGGTTGTTGAAATGGAAGAAAGCTCTTAACCAAGCTGCTAACTTATCTGGCCACCATTTCAATCAAGGAAATGAATATGAACGTGATTTTATTGAAAAAATAGTTACAGACACTTCCAACAAGATTAACCACGTTCCATTACATGTTGCCGATTACCTTATTGGTCTCAAATCTCGAATATCAGAAGTGAATTCACTTCTAGACTTGGAATATAATGATGGTGTCTGCATAATAGGAATCCTTGGTACTGGTGGAATGGGCAAGACAACTCTTGCTCAAGCAGTTTATAATTTGGTTGCTAATCAATTTCAATGTAAGTGTTTCCTTCACAATGTGAGAGAAAATTCAGTCAAACATGGCTTAGAGTATCTTCAAGAGCAGCTTCTCTCCAAATCAATCGGATTTGTAACTAAATTTGGACATGTTAATGAAGGTATTCCAATCATAAAGCAAAGGCTATGTCAAAAGAAAGTTCTCTTGATTCTCGATGACATCGACAAACTAAAGCAATTGCAGGTTTTGGTTGGAGAGCCTGGTTGGCTTGGTCGTGGCAGCAGAGTCATCATTACCACTCGAGACAAACATTTGTTAACATGTCATGGGATTAAAACAATATATGAAGTAGATGGATTAAATGAGGAAGAAGCTCTTGAACTGTTAAGGTGGAAGGCATTTAAAGGCAACGAAATTGATTCTAGTTATAACTATATTTTAAACCGTGTAGTTAAATATGCTGCTGGCCTCCCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGTGTTTAGCAGATTGGAAATGTGCATTGGATAAGTATGAAAGGATACCACCTGAAGATATCCAAAATATACTAAAAATAAGCTTTGATGCTCTGGATGAAGAACAAAAGAGTGTCTTTTTGGATATTGCTTGTTGCTTCAAAGAGCATGTATTGGCATATGTCGAAGAAATGCTTCATGGTCATTATGGTCATTGCATAAAAAGCCACCTCGAAGTGTTGGTTGATAAATCTCTCATAAAGATTAATACTAAATACTATTGGGGATCTCATGATGTCTATGTTACAGTACATGACTTGATAGAGGACATGGGTAAAGAAATCGTTCGGCAAGAATCACCTAAAGAGCCTGGAGAACGGAGTAGATTGTGGTGTTATAATGACATAGTTCATGTTTTACAGGAAAATACAGGAACTAGTAAAATTGAAATGATATATACGAATTTCGATTCCATGAAATCCGTAACAGTCTGGAATGGAAAGGCCTTCAAGAAGATGAAAAAACTCAAAACACTTATCATTGAAAATGACCATTTTTCTGAAGGTCCCAAGTATCTTCCAAATAGTTTGAGAGTATTGAAATGGAAAGGATGTCCTTCAAAGTCTCTATCATCTTGTTTTTCGAATAAGAAGTTCGAGAATATGAAAGTCTTGACATTTAACCGTTGTCAATATTTAATGAAAATACCCGATGTCTCAGGTCTTCAAAGCTTAAAAGAGTTCTCATTTGAAGAGTGTAATAATTTAATTACAATTCACGATTCGATTGGGTACCTAAATAAACTTGAAATCTTAAATGCACAGGGTTGTAGCAAGCTCGAGAGTTTTCCTCCCTTACAGTTGGCATCTCTTAAGAAATTGGAACTATCTAGATGTAGGAACCTAAAGAGTTTTCCAGAATTATTATGCAAGATGACAAAGATAGAACATATTTGGTTGGCAGATAGTTCCATAGGAGAATTGCCATTTTCATTTCAAAATCTCAGTGCAGTTTATGCCTTAACAATATACGACTGCAAAATACTTAGGCTTTCAAGTGACATTTTTATGATGCCTAACTTGTCAGATATTAATGCATCGGGTTGTTGTGGTCTATTATTGCCAAAACATAATGATATAATTAGTTCAACAATGTCTTCAAATGTGGATTATCTTGAGCTCGTAGATTGCAACCTCTCAGATGAATGTCTTCCGTTGGTTCTCAAGTGGTGTGCTAATGTGAAACATCTAGACTTGTCGAAGAACAATTTCAAAAATTTCCCCAAGTGCCTTAACGAATGTCACCTTCTTAGGGTCCTTAAATTGGATGGTTGTGAATATCTTGAGGAAATTAAAGGGATTCCACCGAATCTTGAAAAAATATCTGCAATAGAGTGCAAATCATTGATTTCCTCAAGTAGAAGAATTTTACTTAGTCAGAACCTACATGAAGCTGGATGCACAGAGATTTGTTTCCCGACCGGGACAGAAGGGATTCCAGATTGGTTTGAGCACCAAAGCAGGGGGCACACAATTTCTTTCTGGTTTCGTAAAGAAATCCCTTCTATAACTTCTATCATTATTATTGTTGGGGATAATCAATTTAGTCTAAGAGTCAATTTGTTTGTCAAAGGCAATAAATATACTTTTTCTAAATATTTTGGTTGTTCCCTTTTCAATGTGCGGTCAGTACATACACATTTGTTTGATCAATGGAATCTGGTGTCTGAAAAAGCACCGTTAAAAAATGAATGGATCCGTGTGGAGCTTAATTTGGAGAGTTCTCGGAATTCCAATCTTAGTACACAAATGGGAATCCATGTGTTCAATAAGAAAACAAGCACGAAGGAGGATGTGATATTAACCGATCCTTGTCGAAAGAGAAAATTCGATGAGTATCTCAATGCTTCATCACCACAATTTGTGGAAGTGAGAGTTTCAGAGACAGAAAGTTTGCAGAACTTGGAACATACTGAAACAAAAGAAAAAAAGCACCATAACTAG 3201 0.3689 MAMQSPSSSSSLSYGFSFDVFISFRGTDTRYGFTGNLYKALSDKGIRTFIDDKELQRGDEITPSLLKSIEDSRIAIIVFSKDYASSSFCLDELVHIIQCSNEKGTTVIPVFYGTEPSQVRHQNDSYGEALAKHEEGFQNSKENMERLLKWKKALNQAANLSGHHFNQGNEYERDFIEKIVTDTSNKINHVPLHVADYLIGLKSRISEVNSLLDLEYNDGVCIIGILGTGGMGKTTLAQAVYNLVANQFQCKCFLHNVRENSVKHGLEYLQEQLLSKSIGFVTKFGHVNEGIPIIKQRLCQKKVLLILDDIDKLKQLQVLVGEPGWLGRGSRVIITTRDKHLLTCHGIKTIYEVDGLNEEEALELLRWKAFKGNEIDSSYNYILNRVVKYAAGLPLALEVVGSNLFGKCLADWKCALDKYERIPPEDIQNILKISFDALDEEQKSVFLDIACCFKEHVLAYVEEMLHGHYGHCIKSHLEVLVDKSLIKINTKYYWGSHDVYVTVHDLIEDMGKEIVRQESPKEPGERSRLWCYNDIVHVLQENTGTSKIEMIYTNFDSMKSVTVWNGKAFKKMKKLKTLIIENDHFSEGPKYLPNSLRVLKWKGCPSKSLSSCFSNKKFENMKVLTFNRCQYLMKIPDVSGLQSLKEFSFEECNNLITIHDSIGYLNKLEILNAQGCSKLESFPPLQLASLKKLELSRCRNLKSFPELLCKMTKIEHIWLADSSIGELPFSFQNLSAVYALTIYDCKILRLSSDIFMMPNLSDINASGCCGLLLPKHNDIISSTMSSNVDYLELVDCNLSDECLPLVLKWCANVKHLDLSKNNFKNFPKCLNECHLLRVLKLDGCEYLEEIKGIPPNLEKISAIECKSLISSSRRILLSQNLHEAGCTEICFPTGTEGIPDWFEHQSRGHTISFWFRKEIPSITSIIIIVGDNQFSLRVNLFVKGNKYTFSKYFGCSLFNVRSVHTHLFDQWNLVSEKAPLKNEWIRVELNLESSRNSNLSTQMGIHVFNKKTSTKEDVILTDPCRKRKFDEYLNASSPQFVEVRVSETESLQNLEHTETKEKKHHN* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1605 1066 CDD AAA 199 338 - -
Mtr2g1605 1066 PRINTS Disease resistance protein signature 222 237 - -
Mtr2g1605 1066 PRINTS Disease resistance protein signature 297 311 - -
Mtr2g1605 1066 PRINTS Disease resistance protein signature 390 404 - -
Mtr2g1605 1066 PRINTS Disease resistance protein signature 685 701 - -
Mtr2g1605 1066 Pfam NB-ARC domain 206 433 IPR002182 GO:0043531
Mtr2g1605 1066 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Mtr2g1605 1066 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 991 IPR044974 GO:0006952
Mtr2g1605 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
Mtr2g1605 1066 ProSiteProfiles TIR domain profile. 16 187 IPR000157 GO:0007165
Mtr2g1605 1066 SUPERFAMILY L domain-like 560 874 - -
Mtr2g1605 1066 Gene3D - 188 351 IPR027417 -
Mtr2g1605 1066 SUPERFAMILY "Winged helix" DNA-binding domain 426 540 IPR036390 -
Mtr2g1605 1066 Gene3D Ribonuclease Inhibitor 710 890 IPR032675 -
Mtr2g1605 1066 SMART till_3 17 160 IPR000157 GO:0007165
Mtr2g1605 1066 Gene3D - 16 187 IPR035897 -
Mtr2g1605 1066 Pfam TIR domain 18 190 IPR000157 GO:0007165
Mtr2g1605 1066 Gene3D Ribonuclease Inhibitor 539 709 IPR032675 -
Mtr2g1605 1066 Gene3D - 355 439 IPR042197 -
Mtr2g1605 1066 PANTHER ARCHAEAL ATPASE 28 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1605 Mtr-Chr2 18037367 18042855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1605 6 771 WRKY Transcription Factor Family AT4G12020 28.325 1.26e-69 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1605 - - mtr:MTR_6g072590 1139.02