Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1599 ATGAATTTGGTTGGACAAGTTCCAAGTCTAGGGAATTTACAAGACCTTTCCATTCTAAATTTGGAAGAAAACAATTTAGGTGATAATTCAACTATGGATTTAGAGTTTTTAAAATATTTGACAAATTGCAGTAAACTACACAAGTTTTCGATATCTTATAATAATTTTGGAGGTCATTTGCCAAATTCCATAGGGAATTTATCCACTGAACTTAAACAACTATATATGGGGGGTAATCAGATATCAGGAAAAATTCCTGCAGAATTAGGAAGTGTAGTTGGCTTAATTCTCTTGACCATGGAGTCTAACTGCTTTGAAGGAACTATTCCAACTACATTTGGGAAGTTAAAAAATATGCAGAGATTACATTTGGAGGAAAACAAGTTGTCAGGAGATATTCCACCCTTCATAGGCAATCTCAGTCAATTGTATGATTTAGAATTAGATCATAATATGTTTCAAGGAATTATTCCTCCAAGCTTAGGAAACTGTCAAAATTTACAATATCTAGATCTGTCTCATAATAAGCTTAGAGGAACCATACCTGTAGAGGTTTTAAATCTTTTTTCTTTATCAATCTTATTGAACTTGTCACATAACTCTTTGAGTGGTACCTTACCAAGAGAAGTGAGTATGTTAAAAAATATTGAAGAATTAGATGTCTCTGAGAATCATCTATCTGGTGATATTCCGAGAGAAATTGGTGAATGTATAAGCTTAGAATATATTCATTTGCAAAGGAACTCCTTCAACGGAACAATACCGTCCTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGGTATGCAAAATATCTCATTTTTGGAATATTTGAATGTTTCTTTTAACATGTTGGAAGGAGAGGTACCGACAAATGGTGTATTTGGAAATGCAACCCAAATAGAAGTGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCCCACCTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACATGCAAAACAACACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTATTCTCATACTTTCATTTATCATCACTATCTACATGATGAGGAAGAGAAATCAAAAGAGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTACACGTAGGAACCGATGGATTCTCAGATAGAAACATGATCGGATCAGGAAGTTTTGGTTCCGTATACAGAGGAAATATTGTTTCAGAAGATAATGTTGTTGCAGTTAAAGTCTTGAACCTCCATAAAAAGGGAGCTCACAAGAGTTTCGTTGTTGAATGTAACGCACTCAAAAATATTAGACACCGAAATTTGGTTAGGGTTTTAACATGTTGTTCTAGCACAAATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAATACATGAAAAATGGAAGCTTAGAACAGTGGTTACATCCTGAGACTTTGAATGCAAATCCTCCAACAACATTGAACCTTGGTCATAGATTAAACATCATCATCGATGTTGCTTCTGCATTGCATTACCTTCATCGAGAATGTGAGCAGTTAATCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTTCCGGTACCTCTAATAAGAATACTAGTACGATCGGAATAAAAGGAACAGTTGGTTATGCTCCATCGGAGTATGGGATGGGTTCAGAAGTATCCACTTATGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACCGGAAGAAGACCCACCGATGAACTTTTTAAAGACGGTCAAAATCTACATAACTTTGTTACAATTTCATTTCCTTGCAATCTTATAAAGATTTTGGATCCACATCTTTTACCAAGAGCTGAAGATGGAGCACGAGAAGATGGAAATCATGAGATTCTTCTTCCAACTGTAGAGGAGTGCTTAGTTTCCCTTTTTAGGATTGGACTTTTTTGTTCATTGGAATCACCAAAAGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTACCACAATCCAGAAGGTCTTTCTAGATGGTCTTGAACAAAATTTCTAA 2157 0.3556 MNLVGQVPSLGNLQDLSILNLEENNLGDNSTMDLEFLKYLTNCSKLHKFSISYNNFGGHLPNSIGNLSTELKQLYMGGNQISGKIPAELGSVVGLILLTMESNCFEGTIPTTFGKLKNMQRLHLEENKLSGDIPPFIGNLSQLYDLELDHNMFQGIIPPSLGNCQNLQYLDLSHNKLRGTIPVEVLNLFSLSILLNLSHNSLSGTLPREVSMLKNIEELDVSENHLSGDIPREIGECISLEYIHLQRNSFNGTIPSSLASLKGLRYLDLSRNQLSGSIPDGMQNISFLEYLNVSFNMLEGEVPTNGVFGNATQIEVIGNKKLCGGISHLHLPPCPIKGRKHAKQHKFRLIAVIVSVVSFILILSFIITIYMMRKRNQKRSFDSPTIDQLAKVSYQELHVGTDGFSDRNMIGSGSFGSVYRGNIVSEDNVVAVKVLNLHKKGAHKSFVVECNALKNIRHRNLVRVLTCCSSTNYKGQEFKALVFEYMKNGSLEQWLHPETLNANPPTTLNLGHRLNIIIDVASALHYLHRECEQLILHCDLKPSNVLLDDDMVAHVSDFGIARLVSTISGTSNKNTSTIGIKGTVGYAPSEYGMGSEVSTYGDMYSFGILMLEMLTGRRPTDELFKDGQNLHNFVTISFPCNLIKILDPHLLPRAEDGAREDGNHEILLPTVEECLVSLFRIGLFCSLESPKERMNIVDVTRELTTIQKVFLDGLEQNF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1599 718 Pfam Leucine rich repeat 239 298 IPR001611 GO:0005515
Mtr2g1599 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Mtr2g1599 718 PANTHER LRR RECEPTOR-LIKE KINASE 2 712 - -
Mtr2g1599 718 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Mtr2g1599 718 SMART serkin_6 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1599 718 Gene3D Phosphorylase Kinase; domain 1 373 485 - -
Mtr2g1599 718 ProSiteProfiles Protein kinase domain profile. 404 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1599 718 SUPERFAMILY L domain-like 70 324 - -
Mtr2g1599 718 SMART LRR_typ_2 116 140 IPR003591 -
Mtr2g1599 718 SMART LRR_typ_2 261 284 IPR003591 -
Mtr2g1599 718 SMART LRR_typ_2 164 188 IPR003591 -
Mtr2g1599 718 SMART LRR_typ_2 213 237 IPR003591 -
Mtr2g1599 718 PRINTS Leucine-rich repeat signature 167 180 - -
Mtr2g1599 718 PRINTS Leucine-rich repeat signature 261 274 - -
Mtr2g1599 718 Gene3D Ribonuclease Inhibitor 1 343 IPR032675 -
Mtr2g1599 718 Pfam Protein kinase domain 406 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1599 718 Gene3D Transferase(Phosphotransferase) domain 1 486 712 - -
Mtr2g1599 718 SUPERFAMILY Protein kinase-like (PK-like) 379 703 IPR011009 -
Mtr2g1599 718 PANTHER OS04G0122200 PROTEIN 2 712 - -
Mtr2g1599 718 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1599 Mtr-Chr2 17968054 17971068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1599 2 711 Receptor kinase-like Gene Family AT3G47570 46.741 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr2g1599 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1599 - - mtr:MTR_6g036870 1047.34