Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1587 ATGAAGAAAGGATGTTTAGCTCCAAATCTCAAACTCAATGTTCCTTCATCTAATCAAGCTTCTTTTGCAAAGTTCTTGACTCAAAGTGGTACTTTTAAAGAAGGGAACTTGCTTGTTAATAAAGATGGAGTTAGAATTGTTTCTCAAAGTGAAGTTGAAACTCAACCACCAATCAAGCCAATAGACAATCAGATAAGTTTGGCAGAGATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTCCAATTGGTGCAACATAAATGGACTAATCAGTTTTTTGCATTAAAGCAAATTCAAATGAATCTTGAGGATGCAACATGCAAGCAGATAGCAAAAGAGCTAAAAATCAATCAATCAGCACTATGTCCTTATGTTGTTGTTTGTTACCAATCAATCTATGATAATGGCACCATATCAATCATCTTAGAGTACATGGATGGTGGGTCCTTAGAGGATCTTCTCAACAAAGTTAAAACAATTCCAGAACCATTTCTTGCTGCAATATGCAAGCAGGTGCTGAAGGGTTTGATGTATCTTCACCATGAGAAACACATAATTCATAGGGACTTGAAACCTTCTAATATACTGATAAATCATAGAGGGGAGGTGAAAATTACTGATTTTGGTGTAAGTGCAATTATGGAATCTACATCTGGTCAAGCAAATACTTTCATTGGTACATACAACTATATGTCTCCAGAAAGAATCAAAGCAAGCGACAGCGAACAAGGCTACAATTACAAAAGTGATATATGGAGCTTAGGACTGATGTTGCTCAAGTGTGCTACTGGGAAGTTTCCATATACACCGCCAGATAACAGTGAAGGATGGGAAAATTTGTTTCTGCTTATTGAAGCAATTGTTGAAAAACCTTCACCGAGTGCTCCACCTGATGAATGTTCTCCTGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCGAGGGACAGACCATCAACTCGAAACCTATTGAGGCATCCTTTTGTCAACATGTATGATGACTTGCATGTGGATCTTTCAGATTATTTCTCCAATGCAGGGTCTACACTTGCAACCATTTCAAACTAA 1083 0.3712 MKKGCLAPNLKLNVPSSNQASFAKFLTQSGTFKEGNLLVNKDGVRIVSQSEVETQPPIKPIDNQISLAEIDTIKVIGKGNGGIVQLVQHKWTNQFFALKQIQMNLEDATCKQIAKELKINQSALCPYVVVCYQSIYDNGTISIILEYMDGGSLEDLLNKVKTIPEPFLAAICKQVLKGLMYLHHEKHIIHRDLKPSNILINHRGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERIKASDSEQGYNYKSDIWSLGLMLLKCATGKFPYTPPDNSEGWENLFLLIEAIVEKPSPSAPPDECSPEFCSFISACLQKNPRDRPSTRNLLRHPFVNMYDDLHVDLSDYFSNAGSTLATISN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1587 360 ProSiteProfiles Protein kinase domain profile. 70 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1587 360 Gene3D Transferase(Phosphotransferase) domain 1 150 357 - -
Mtr2g1587 360 Pfam Protein kinase domain 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1587 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Mtr2g1587 360 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Mtr2g1587 360 SMART serkin_6 70 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1587 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 360 - -
Mtr2g1587 360 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Mtr2g1587 360 SUPERFAMILY Protein kinase-like (PK-like) 72 342 IPR011009 -
Mtr2g1587 360 CDD PKc_MAPKK_plant_like 68 338 - -
Mtr2g1587 360 PANTHER MAP KINASE KINASE 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1587 Mtr-Chr2 17809863 17813676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1587 27 360 MAP Kinase Kinase Gene Family AT4G26070 63.772 4.06e-161 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mtr2g1587 Pkinase 4.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1587 K20603 - gmx:100789734 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4638 4 60347905 60353453 Mtr2g1587 2 17809863 17813676 PCT