Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1582 ATGCATCATATCATGACACAACCTTCTTTGTCTGGCTCTTCTATCTTCACCTATGATGTTTTCATCAGTTTTAGAGGCATAGATACCCGCAACAATTTCACGCGCGACCTTTACGATATTCTTGATCAAAACGGTATTCACACTTTCTTTGATGAACAAGAAATTCAAAAAGGAGAAGAGATCACACCATCACTTCTTCAAGCTATTCAACAATCTAGAATTTTCATTGTTGTTTTCTCTAACAACTATGCTTCCTCTACTTTTTGCTTGAATGAACTTGTCATGATCCTTGACTGTTCCAACACACATAGACGCTTGCTTTTGCCGGTTTTTTATGACGTCGATCCATCACAAGTTCGCCACCAAAGCGGTGCTTATGGTGAAGCTTTGAAAAAACATGAAGAGAGGTTTAGTGATGATAAGGATAAGGTGCAAAAATGGAGGGATTCTTTATGTCAAGCTGCTAATGTTTCTGGCTGGCATTTCCAACATGGGTCACAATCAGAATACCAATTTATTGGTAATATCGTCGAGGAAGTCACTAAGAAGATCAATCGCACTCCTTTACATGTTGCTGATAACCCAGTTGCGCTAGAGTCTCCAGTGTTGGAAGTGGCATCTCTTCTACGGATCGGATCTGATGAGGGAGCCAACATGGTTGGCATTTATGGAACCGGTGGTGTAGGAAAATCAACATTGGCTCGTGCTGTGTATAATAACCAAATTTCTGATCAATTTGATGGTGTGTGTTTTCTTGATGATATAAGAGAAAATGCAATTAACCATGGTCTTGTGCAACTCCAAGAAACACTGCTTTCTGAAATACTTTGTGAGAAGGATATTAGAGTGGGTAATGTTAGCAGAGGAATTTCAATCATAAAAAGAAGGCTCCAAAGAAAAAAGGTACTTTTGGTTCTTGATGATGTTGACAAAGCGAAGCAGATACAAGTACTTGCAGGTGGACATTATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTACAAGAGACAAACATTTGTTGGCTATTCATGAGATTCTGAATTTATATGAGGTTAAACAGTTAAATCATGAAAAATCTCTTGAATTGTTTAATTGGCATGCCTTTAGAAACAGAAAAATGGATCCATGTTACAATGATATTTCAAACCGTGCAGTTTCTTATGCTCATGGCCTTCCATTAGCTTTGGAGGTGATAGGTTCTCATTTGTTTGGCAAAAGATTAGATGTGTGGAAATCTGCATTAGATAAATATGAAAGAATTCTTCATGAAGATATTCATGAAGTTCTTAAAGTTAGCTATGATGATTTGGATAAAGATGACAAGGGTATTTTTCTTGACATTGCTTGTTTCTACAATTCTTATGAAATGGGCTATGCCAAAGAAATGTTATACGTACATGGTTTTAGTGCTGAAAATGGCATTCAAGTGCTGACCGACAAATCCCTCATAAAAATTGATGGCAATGGTTGTGTTAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATCGTGAGGCAGGAATCAACTTTGGAGCCTGGCAAACGCAGTAGATTATGGTCTGATGACGATATAATTCATGTTTTGGAAGAAAATACGGGCACTGATACAGTTGAAGTCATAATCATCGACTTGTACAATGACAAAGAAGTGCAATGGAGTGGAACAGCCTTCGAGAATATGAAAAACCTTAAAATTCTTATAATTAGAAGTGCACGCTTTTCTAGAGGTCCTAAAAAATTACCAAATAGTTTAGGAGTTTTAGACTGGAGTGGATATTCATCACAATCTTTGCCAGGTGATTTCAATCCTAAGAAGCTTATGATGCTTAGCCTACATGAAAGTTGCCTTATATCGTTCAAATCACTTAAGGTGTTTGAGTCCTTGAGCTTTCTGGATTTTGAAGGATGCAAGTTATTAACTGAGCTACCTAGCTTATCTGGACTAGTAAATCTGGGGGCACTTTGTCTTGACGATTGCACTAATTTAATCGCAGTTCATAAGTCAGTTGGTTTTCTCAATAAACTCGTGTTATTGAGTACTCAAAGATGCAACCAGCTAGAACTTTTGGTGCCCAACATCAATCTGCCATCTCTAGAGACTCTAGATATGAGGGGTTGTTTGCGTCTCAAGAGCTTCCCTGAAGTATTGGGAGTAATGGAGAATATAAGATATGTTTATTTAGACCAAACTTCCATAGATAAGTTGCCATTTTCAATTAGAAATCTTGTTGGCCTCCGACAATTGTTCTTGAGGGAATGCGCGAGCCTAACTCAGCTACCGGATAGTATTCATATATTGCCTAAACTTGAGATAATAACGGCTTATGGTTGTATAGGATTTCGATTGTTTGAGGATAAAGAAAAAGTGGGTTCAAAAGTGTTTCCAAAAGCCATGCTTGTTTATAAAGAAGGAAGTCCGGTATTGCTTGATATGTCCTCTCTTAACATATGCCCCGATAATGCCATAGAAGTATTTTGTTCTTCATTTATTCGTATGAATGCTGATTTCATCAGCATAGGGATTCTTGAAGGTAGAGGAAATTGGTATCAACATGAAAGCAACGAATCATCCTTACATTTTTGGTTTCAAAATAAATTCCCCAAGATTGCTCTTTGTTGTGCTGTAAAACCTCCTGTGTGTAAAGGCAATATGTTGTTGGATTTCAATTTCAGTGTGCTCATCAATGGCACTAAGCAATTCACTTCTTCATGCAACTACATGTTTTCTGCTGAAAAAATAACTGAACAAGTTCTTATGTGTGATTTACAGTGCAAAGTGGAAAGATTGTATTTAGAGCATGAATGGAATCAAGTAGATATTTTATATGAGTTTAAATACCTTATGCCATGTGGCTCTAAAAGGATAATGGCTACCCATGATAGGACCACAACAAGAAATCCAAGTTGGTCCTTCATTTATGCCTTTGAAGATAACAAAGTGGGTGTCAAATTTCTGTCGGAGTTTGAGGAACGGGAAGAGCAGTACAGAAGAAATGAAGCATATTCTTGGTTTGATTCATTTTTTTTCGCAAGATCTTTATCTCCTTTAGTAAAAAAAAAGAGACCTGTCTTTCCTTTTTTCCCGGTCCAAAGGTTAGAGGTACCAGTGATTGGGATCGATCTCGGAACCACATACTCATGCGTAGGTGTATGGCAACATGACCGTGTTCACATCATCGCCAACGACCAAGGCAACAGAACCACATCGTCTTACGTCGCCTTTACTGACTCCGAGTGTCTCATCGGTGATGCCGCTAAGAATCAAGTCTCCTCGAACCCTATCAACACCGTCTTCGATGCTAAGAGGTTGATTGGTCGTAGATTCAGCGATATCTCCGTTCAGAGTGATATGAAGTTGTGGCCTTTTAAGATTATTTCTGGCCCGGATGATAAGCCAATGATTGGTGTTAACTACAATGGTGAAGATAAGCAATTTACTGCAGAAGAGATCTCTTCCATGTTACTCTGGAAGATTCGTCAGATTGCTGAGGCCTACTTTGGCTCTCCCATTAGGAATGCTGTTGTTACTGTCCCTGTTTACTTTAATAATTCTCAGAGACAAGCTACTAAGGATGCTGCTGTTATTGCTGAACTTAATGTCATGGGAATTATCGATGAGCCCACTGCTTCAGCCATTGCTTATGTTCTTGAAACAACCAGTGTTGGAGAGAAAAATGTCTTGATCTTTGACCTTGGCGGTGGTACTTTTGATGTCTCTTTGCTAACTATTATTAAAAATTATCATGGCTTGTTCTGTGAGGTTAAAGCAATATCCGGAGACCCCCATCTTGGAGGTGAGGATTTTAATAACAGAATGGTGAACTACTTTGTTCAAGAGTTCAAGAGAAAGAACAGGAAGGACATCAGTGGCGACCAAAGAGCTCTTATGAGGTTGAGGACTGCTTGTGAGAAGGCCAAGAGAACTCTATCATTTACTCTCCAAACCACCATTGAAATTGTTTGTTTATTCAAGGGAATGGATTTCTTCACCATCATTACTCGTGCCAGATTTGAAGAGCTCAACATGGATCTCTTTATGAAATGTATGGAGACTGTCGAGAAACTTTTGAGATTTGCTAGGATGGACAAAACAAGTGTCCATGATGTTGTCCTTGTAGGAGGTTCTACCAGAATTCCAAAGGTTCAACAACTATTGCAGGATTTCTTTAACAGAAAGAAGCTATGCGATAGCATTAATCCCGACGAGGTTGTTGCATATGGTGCTGCATTTTACGCTGCAATCTTGAGTGCGTTGGAGAGAAGAATGTCTTAA 4278 0.3876 MHHIMTQPSLSGSSIFTYDVFISFRGIDTRNNFTRDLYDILDQNGIHTFFDEQEIQKGEEITPSLLQAIQQSRIFIVVFSNNYASSTFCLNELVMILDCSNTHRRLLLPVFYDVDPSQVRHQSGAYGEALKKHEERFSDDKDKVQKWRDSLCQAANVSGWHFQHGSQSEYQFIGNIVEEVTKKINRTPLHVADNPVALESPVLEVASLLRIGSDEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENAINHGLVQLQETLLSEILCEKDIRVGNVSRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHYWFGSGSKIIITTRDKHLLAIHEILNLYEVKQLNHEKSLELFNWHAFRNRKMDPCYNDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKVSYDDLDKDDKGIFLDIACFYNSYEMGYAKEMLYVHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYNDKEVQWSGTAFENMKNLKILIIRSARFSRGPKKLPNSLGVLDWSGYSSQSLPGDFNPKKLMMLSLHESCLISFKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIAVHKSVGFLNKLVLLSTQRCNQLELLVPNINLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYGCIGFRLFEDKEKVGSKVFPKAMLVYKEGSPVLLDMSSLNICPDNAIEVFCSSFIRMNADFISIGILEGRGNWYQHESNESSLHFWFQNKFPKIALCCAVKPPVCKGNMLLDFNFSVLINGTKQFTSSCNYMFSAEKITEQVLMCDLQCKVERLYLEHEWNQVDILYEFKYLMPCGSKRIMATHDRTTTRNPSWSFIYAFEDNKVGVKFLSEFEEREEQYRRNEAYSWFDSFFFARSLSPLVKKKRPVFPFFPVQRLEVPVIGIDLGTTYSCVGVWQHDRVHIIANDQGNRTTSSYVAFTDSECLIGDAAKNQVSSNPINTVFDAKRLIGRRFSDISVQSDMKLWPFKIISGPDDKPMIGVNYNGEDKQFTAEEISSMLLWKIRQIAEAYFGSPIRNAVVTVPVYFNNSQRQATKDAAVIAELNVMGIIDEPTASAIAYVLETTSVGEKNVLIFDLGGGTFDVSLLTIIKNYHGLFCEVKAISGDPHLGGEDFNNRMVNYFVQEFKRKNRKDISGDQRALMRLRTACEKAKRTLSFTLQTTIEIVCLFKGMDFFTIITRARFEELNMDLFMKCMETVEKLLRFARMDKTSVHDVVLVGGSTRIPKVQQLLQDFFNRKKLCDSINPDEVVAYGAAFYAAILSALERRMS* 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1582 1425 ProSitePatterns Heat shock hsp70 proteins family signature 3. 1371 1385 IPR018181 -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1037 1050 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1065 1077 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1087 1095 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1175 1195 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1236 1246 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1368 1384 - -
Mtr2g1582 1425 PRINTS 70kDa heat shock protein signature 1400 1420 - -
Mtr2g1582 1425 SUPERFAMILY Actin-like ATPase domain 1037 1219 IPR043129 -
Mtr2g1582 1425 Pfam NB-ARC domain 205 435 IPR002182 GO:0043531
Mtr2g1582 1425 Gene3D - 1039 1415 - -
Mtr2g1582 1425 Gene3D Ribonuclease Inhibitor 529 690 IPR032675 -
Mtr2g1582 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 448 IPR027417 -
Mtr2g1582 1425 Gene3D Actin; Chain A, domain 4 1266 1349 - -
Mtr2g1582 1425 Gene3D - 1221 1397 - -
Mtr2g1582 1425 PANTHER ARCHAEAL ATPASE 28 787 - -
Mtr2g1582 1425 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1041 1048 IPR018181 -
Mtr2g1582 1425 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 787 IPR044974 GO:0006952
Mtr2g1582 1425 Gene3D - 183 347 IPR027417 -
Mtr2g1582 1425 SMART till_3 17 157 IPR000157 GO:0007165
Mtr2g1582 1425 Gene3D - 17 182 IPR035897 -
Mtr2g1582 1425 Pfam Hsp70 protein 1038 1419 IPR013126 GO:0005524|GO:0140662
Mtr2g1582 1425 SUPERFAMILY Actin-like ATPase domain 1225 1418 IPR043129 -
Mtr2g1582 1425 ProSitePatterns Heat shock hsp70 proteins family signature 2. 1230 1243 IPR018181 -
Mtr2g1582 1425 Pfam TIR domain 18 187 IPR000157 GO:0007165
Mtr2g1582 1425 Gene3D Ribonuclease Inhibitor 691 816 IPR032675 -
Mtr2g1582 1425 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Mtr2g1582 1425 Gene3D - 1100 1155 - -
Mtr2g1582 1425 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Mtr2g1582 1425 SUPERFAMILY L domain-like 540 787 - -
Mtr2g1582 1425 CDD AAA 222 350 - -
Mtr2g1582 1425 SMART AAA_5 216 355 IPR003593 -
Mtr2g1582 1425 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Mtr2g1582 1425 Gene3D - 354 438 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1582 Mtr-Chr2 17733588 17742486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1582 1035 1419 Calmodulin-binding Proteins AT3G12580 78.295 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1582 - - mtr:MTR_2g040370 2323.12