Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1580 ATGACACAAGCTTCATTGTCTGTCTCTTCTAGCTTCACCTATGATGTTTTCATCAGTTTTAGAGGAATAGATACCCGCAACACTTTCACTGGTAACCTCTACAATTCTCTTGATCAAAAGGGTATTCACACTTTCCTTGATGAAGAAGAAATTCAAAAAGGAGAACAAATAACACGAGCACTTTTTCAAGCAATTCAACAATCTAGGATTTTCATTGTTGTTTTCTCTAACAACTATGCTTCCTCAACTTTTTGTTTGAATGAACTTGCCGTGATCCTTGAGTGTTCCAACACACATGGACGCTTGCTTTTGCCCGTTTTTTATGATGTCGAACCATCACAAGTTCGCCACCAAAGTGGTGCTTATGGTGATGCTTTGAAAAAACATGAGGAGAGGTTTAGTGATGATAAGGATAAGGTGCAAAAATGGAGGGATGCTTTATGTCAAGCTGCTAATGTTTCTGGCTGGCATTTCCAACATGGGTCACAATCAGAATACAAATTTATTGGAAATATCGTTGAGGAAGTCACTAAGAAGATCAATCGCACTCCTTTACATGTTGCTGATAACCCAGTTGGGCTAGATTATCCAGTGTTAGATGTGGCATCTCTTCTAGGGATCGGATCTGATGAGGGAGCCAACATGGTTGGCATTTATGGAACCGGCGGTGTAGGAAAATCAACATTGGCTCGTGCTGTGTATAATAACCAACTTTCTGATCAATTTGATGGTGTGTGTTTTCTTGCTGATATAAGAGAAAGTACAATTAAACATGGTCTTGTGCAACTCCAAGAAACACTACTTTCTGAAATACTTTGTGAGAAGGATATTAGAGTGGGTAATGTTAACAGAGGAATTTCAATCATAAAGAGGAGGCTCCAAAGCAAAAAGGTACTTTTGGTTCTTGATGATATTGACAAAGCGAAGCAGATACAAGTACTTGCAGGTGGACATGATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTACAAGAGACAAACATTTGTTGGCTATTAATGGGATTCTAAGTTTATATGAGGTTAAACAGTTAAATAATAAAAAATCTCTTGAGTTGTTTAACTGGTATGCCTTTAAAAACAACAATGTTGATCCATGTTATGGCGATATCTCAAAACGTGCAGTTTCTTATGCTGGTGGCCTTCCGTTGGCTTTGGAGGTCATAGGTTCTCATTTGTGTGGAAGAAGTTTGTGTGCATGGAAAGATGCATTAGATAAATATGAAGAAATTCCTCATGAAGATATTCATGAAACTCTTAAAGTTAGCTATAATGATTTGGATGAAAAAGACAAGGGTATTTTTCTTGACATCGCTTGTTTCTTCAACTCTTATGAAATGAGCTATGTCAAAGAAATGCTATACCTACATGGTTTTAAAGCAGAAAATGGAATTGAAGTGCTAACTGACAAATCCCTCATGAAAATTGATGATGGCGGTTGTGTGAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATTGTGAGGCAGGAATCAACTTTGGAGCCTGGCAAACGCAGTAGATTATGGTTTCATGACGACATAATTCATGTTTTGGAAGAAAATACGGGCACTGATACAATTGAGGTCATAATCATCAACTTGTGCAATGACAAAGAAGTGCGTTGGAGTGGAAAAGCATTCAAGAAGATGAAAAACCTAAAAATTCTTATAATTAGAAGTGCACGATTTTCTAAAGATCCTCAAAAACTACCAAATAGTTTGAGAGTTTTAGACTGGAGTGGATATCCATCACAATCTTTGCCAAGTGATTTCAATCCTAAGAATCTTATGATACTTAGCCTACATGAAAGTTGCCTTATATCGTTCAAACCGATCAAGGCGTTTGAGTCCTTGAGCTTTCTGGATTTTGATGGATGCAAGTTATTGACTGAGCTACCTAGCTTATCTGGACTAGTAAATTTGTGGGCACTGTGTCTTGACGATTGCACTAATTTAATCACGATTCATAACTCGGTTGGTTTTCTCAATAAACTTGTGTTATTGAGTACTCAAAGATGCACCCAGCTAGAACTTTTGGTGCCCACCATCAATCTGCCATCTCTAGAGACTCTTGATATGAGGGGTTGCTCGCGTCTCAAGAGCTTCCCTGAAGTATTGGGCGTAATGAAGAATATAAGAGATGTTTATTTAGACCAGACTTCCATAGATAAATTGCCATTTTCAATTCAAAAGCTCGTTGGCCTCCGACGATTGTTCTTGAGGGAATGCTTGAGCCTAACTCAGCTACCGGATAGTATTCGTACATTGCCTAAACTTGAGATAACAATGGCTTATGGTTGTAGAGGATTTCAATTGTTTGAGGATAAAGAAAAAGTGGGTTCAAAAATGTTTCCAAATGCCATGCTTGTTTATAAAGAAGGAAGTCCGGAATTGCTTGATATGTCCTCTCTTAACATCTGCCCTGATAATGCCATAGAAGTATTTAGTACTTCAACTCTTGGTATTAATGTTGATTTCATGAGCAAAGGGATTCTTGAAGGGAGAGGAAATTGGTATCAACATGAAAGCGACAAATCATCCTTACGTTTTTGGTTTCAAAATAAATTCCCCAGGATAACTCTGTGTTGTGCTGTAGAACCTCCTGTGTGTAAAGACAATATGTTGTTGGATTTCAAGTTAAGTGTTCTCATCAATGGCACTGAGCAATTCACTTCTTCATGCAACTACATATTTTCTGCTGAAAAAATAATTCTTCTGTGTGACTTAGTGTGCAAAGTGGAAAGATCATATTTAGAGCATGAATGGAATCAAGTAGATATTTTATATGAGTTTAAATATCCTATGACAAGGACAGCATCAAGAAATCCAAGTTGGTCCTTCATTTATGCCTATGAAGATAACAAAGTGGGTGTCAAATTTCTGTCCCAGTTTGTGGAAGGGGAAGAGACGTGCAGAAGATTCACAACATATATTTGGTTTTCTCGCGTCGCAAGGTTTGTTTGTGAACTGAGAAATGGTTAA 3006 0.3786 MTQASLSVSSSFTYDVFISFRGIDTRNTFTGNLYNSLDQKGIHTFLDEEEIQKGEQITRALFQAIQQSRIFIVVFSNNYASSTFCLNELAVILECSNTHGRLLLPVFYDVEPSQVRHQSGAYGDALKKHEERFSDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTPLHVADNPVGLDYPVLDVASLLGIGSDEGANMVGIYGTGGVGKSTLARAVYNNQLSDQFDGVCFLADIRESTIKHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQSKKVLLVLDDIDKAKQIQVLAGGHDWFGSGSKIIITTRDKHLLAINGILSLYEVKQLNNKKSLELFNWYAFKNNNVDPCYGDISKRAVSYAGGLPLALEVIGSHLCGRSLCAWKDALDKYEEIPHEDIHETLKVSYNDLDEKDKGIFLDIACFFNSYEMSYVKEMLYLHGFKAENGIEVLTDKSLMKIDDGGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWFHDDIIHVLEENTGTDTIEVIIINLCNDKEVRWSGKAFKKMKNLKILIIRSARFSKDPQKLPNSLRVLDWSGYPSQSLPSDFNPKNLMILSLHESCLISFKPIKAFESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTINLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMAYGCRGFQLFEDKEKVGSKMFPNAMLVYKEGSPELLDMSSLNICPDNAIEVFSTSTLGINVDFMSKGILEGRGNWYQHESDKSSLRFWFQNKFPRITLCCAVEPPVCKDNMLLDFKLSVLINGTEQFTSSCNYIFSAEKIILLCDLVCKVERSYLEHEWNQVDILYEFKYPMTRTASRNPSWSFIYAYEDNKVGVKFLSQFVEGEETCRRFTTYIWFSRVARFVCELRNG* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1580 1001 SMART till_3 13 153 IPR000157 GO:0007165
Mtr2g1580 1001 Gene3D - 11 180 IPR035897 -
Mtr2g1580 1001 Gene3D - 350 434 IPR042197 -
Mtr2g1580 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 721 IPR044974 GO:0006952
Mtr2g1580 1001 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 156 IPR035897 -
Mtr2g1580 1001 Pfam TIR domain 14 183 IPR000157 GO:0007165
Mtr2g1580 1001 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 721 - -
Mtr2g1580 1001 Gene3D - 181 341 IPR027417 -
Mtr2g1580 1001 SMART AAA_5 212 351 IPR003593 -
Mtr2g1580 1001 SUPERFAMILY L domain-like 537 783 - -
Mtr2g1580 1001 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Mtr2g1580 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 444 IPR027417 -
Mtr2g1580 1001 Gene3D Ribonuclease Inhibitor 539 690 IPR032675 -
Mtr2g1580 1001 Gene3D Ribonuclease Inhibitor 691 814 IPR032675 -
Mtr2g1580 1001 Pfam NB-ARC domain 209 433 IPR002182 GO:0043531
Mtr2g1580 1001 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Mtr2g1580 1001 CDD AAA 218 344 - -
Mtr2g1580 1001 PRINTS Disease resistance protein signature 215 230 - -
Mtr2g1580 1001 PRINTS Disease resistance protein signature 292 306 - -
Mtr2g1580 1001 PRINTS Disease resistance protein signature 385 399 - -
Mtr2g1580 1001 PRINTS Disease resistance protein signature 691 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1580 Mtr-Chr2 17677266 17681701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1580 9 786 WRKY Transcription Factor Family AT4G12020 33.250 3.13e-98 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1580 - - mtr:MTR_2g040220 2005.33