Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1579 ATGACACAAGCTTCATTGTCTGTCTCTTCTAGCTTAACCTATGATGTTTTCATCAGTTTTAGAGGTATAGATACCCGCAACAATTTCACCCGTGACCTCTACGATTCTCTAGATCAAAACGGTATTCACACTTTCTTTGATGAAAAACAAATTCAAAAAGGAGAACAAATTACACCAGCCCTTTTTCAAGCAATTCAACAATCTAGGATTTTCATTGTTGTTTTCTCTAACAACTATGCTTCCTCTACTTTTTGTTTGAATGAACTTGCCTTGATCCTTGACTGTTCCAACACACATGGACGCTTGCTTTTGCCCGTTTTTTATGATGTCGATCCATCACAAGTTCGCCACCAAAGCGGTGCTTATGGTGAAGCTTTGAAAAAACAGGAGGAAAGGTTTTGTGATGATAAGGATAAGGTGCAAAAATGGAGGGATGCTTTATGTCAAGCTGCTAATGTTTCTGGCTGGCATTTCCAACATGGGTCACAATCAGAATACAAATTTATTGGAAATATCGTTGAGGAAGTCACTAAGAAGATCAATCGCACTCCTTTACATGTTGCTGATAACCCAGTTGCGCTAGAGTCTCCAGTGTTAGAAGTAGCATCTCTTTTAGGGATCGGATCTCATGAGGGAGCCAACATGGTTGGCATTTATGGAACCGGCGGTGTAGGAAAATCAACATTGGCTCGTGCTGTGTATAATAACCAAATTTCTGATCAATTTGACGGTGTGTGTTTTCTTGATGATATAAGAGAAAATGCAATTAATCATGGTCTTGTGCAACTCCAAGAAACACTGCTTTCTGAAATACTTTGTGAGAAGGATATTAGAGTGGGTAATGTTAACAGAGGAATTTCAATCATAAAAAGAAGGCTCCAAAGAAAAAAGGTACTTTTGGTTCTTGATGATGTTGACAAAGCGAAGCAGATACAAGTACTTGCAGGTGGACATGATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTACAAGAGACAAACATTTGTTGGCTATTCATGAGATTCTGAATATATATGAGGTTAAACAGTTAAATCATGAAAAATCTCTTGAATTGTTTAATTGGCATGCCTTTAGAAACAGAAAAATGGATCCATGTTACAGTGATATTTCAAACCGTGCCGTTTCTTATGCTCATGGCCTTCCATTAGCTTTGGAGGTGATAGGTTCTCATTTGTTCGGCAAAAGATTAGATGTGTGGAAATCTGCATTAGATAAATATGAAAGAATTCTTCATGAAGATATTCATGAAGTTCTTAAAATTAGCTATGATGATTTGGATGAAGATGACAAGGGTATTTTTCTTGACATTGCTTGTTTCTACAATTCTGATGAAATGAGCTATGCCAAAGAAATGCTATACCTACATGGTTTTAGTGCTGAAAATGGCATTCAAGTGCTGACAGACAAATCCCTCATAAAAATTGATGGCAATGGTTGTGTGAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATCGTGAGGCAGGAATCAACTTTGGAGCCTGGCAAACGCAGTAGATTATGGTCTGATGACGATATAATTCATGTTTTGGAAGAAAATACGGGCACTGATACAGTTGAAGTCATAATCATCGACTTGTACAATGACAAAGAAGTGCAGTGGAGTGGAGAAGCCTTCAAGAAGATGAAAAAACTAAAAATTCTTATAATTAGAAGTGCACGTTTTTTTAGAGGTCCTCAAAAACTACCAAATAGTTTGAGAGTTTTAGACTGGAGTGGATATCCATCACAATCTTTGCCAATTGATTTCAATCCTAAGAAGCTTAATATACTTAGCCTACATGAAAGTTACCTTATATCGTTCAAACCGATCAAGGTGTTTGAGTCCTTGAGCTTTCTGGATTTTGAAGGATGCAAGTTATTAACCGAGCTACCTAGCTTATCTGGACTATTAAATTTGGGGGCACTGTGTCTTGACGATTGCACTAATTTAATCACGATTCATAAGTCGGTTGGTTTTCTCAATAAACTCGTGTTATTGAGTACTCAAAGATGCAACGAACTAGAAGTTTTGGTGCCCAACATCAATCTGCCATCTCTAGAGATTCTAGATATGAGGGGTTGTTCGTGTCTCAAGAGCTTCCCTGAAGTATTGGGAGTAATGGAGAATATAAGAGATGTTTATTTAGACCAAACTTCCATAGATAAGTTGCCATTTTCAATTAGAAATCTTGTTGGCCTCCGACGATTGTTCTTGAGGGAATGCATGAGCCTAACTCAGCTAACGGATAGTATTCGTATATTGCCGAAACTCGAGATATTAACGGCTTATGGTTGTAGAGGATTTCAATTGTTTGAGAGTAAAGAAAAAGTGGGTTCAGAAGTGTTTCCTAAAGCCATGCTTGTTTATAAAGAAGGAAGCGCAGAATTGCTTGATATGTCCTCTCTTAACATATGCCCCGATAATGTCATAGAAGTAATTAGTACTTCAATTCTTGATGGTAATGTTGTATTAATGAGAAAAGGGATTGCTAAAGGGAGAGGAAATTGGTATCGACATGAAAGCAACGAATCATCCTTACGATTTTGGTTTCAAAATAAATTCCCCAGGATAGCTCTGTGTTGTGCTGTAGAACCTCCTGTGTGTAAAGACAATATGTTGTTGGATTTCAATTTAAGTGTTCTCATCAATGGCACTAAGCAATTCACTTCTTCATGCAACTACATGTTTTCTGCTGAAAAATTAACTGAACAAGTTCTTATGTGTGATTTAGTATGCAAAGTGGAAAGATCGTATTTAGAGCATGAATGGAATCAAGTAGATATTTCATATGAATTTAAATACTCTATGCCATGTGGCTCTAAAAGAATAATGGCTACCCAGGAGATGACCACAACAAGAAATCCAAGTTGGTCCTTCATTTATGCCTATGAAGAAGATAACAAAGTGGGTATCAGATTTCTCTCCCAGTTTGTGGAATGGGTAGAGCAGCACAGAAGAAATATAGCATATTATTGGTTTGGTTCAGTACTTTACACAAGATCTTTCTCTCCATTGGTCGAAAAAGAGAGATCTATCTTTCCCGAACTAAAATTAAAATTATTTAATTTAATGGTCGAAGAGATAGAGGGACCAGCGATTGGGATCGATCTCGGAACCACATACTCATGCGTAGGTGTATGTCAACATGACCGTGTTGAAATCATCGCCAACAACCAAGGTAACAGAACCACACCATCTTACGTTGCCTTTACCGACTCTGACTGTCTCATTGGTGATACTGCTAAGAATCAAGTTGCCTCGAACCCTATCAACACCGTCTTTGATGCTAAGAGGTTGATTGGCCGTAGATTCAGCGATGCCTCTGTTCAGAGGGATATGAAGTTGTGGCCTTTTAAGATGATTTCTGGCCCGGATGAAAAGCCATTGATTGGTGTTAACAACTTTGGTGAAGATAAGCAATTTGCCCCAGAAGAGATCTCATCCATGATACTCTGGAAGATGCGTGAGATTGCTGAGGCCTACGTTGGCTCTGCCATTAGGAATGCTGTTGTTACTGTCCCTGTTTACTTTAATGATTCTCAGAGACAAATTACTAAGGATGCAGCTGTTTTTGCTGGTCTTAATGTCATGGATATTATCGATGAGCCCACTGCTGCAGCCATTGCTTATGGTTTTGACATGACCAGCGTTGGAGAGAAGAATGTCTTAATCTTTGACCTTGGTGGTGGGACTTTTGATGTCTCTTTGCTAACTTTTGAAGAGAGTGACGTTGAGGTTAAAGTTATATCCGGAGACACCCATCTTGGAGGTGAGGATTTTAATAACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGAAAGAACAAGAAGGACATCAGTGGCAACCCAAGAGCTCTTATGAGGTTGAGGACTGCTTGTGAGAAGGCCAAGAGAACTCTATCATTTACTGTCCAAACCACCATTGAAATTGATTGTCTATTCGAGGGAATTGATTTCTGCTCCCCCATTACTCGTGCCACATTTGAAAAGCTCAACATGGATCTCTTTAGGAAATGTATGGAGCAAGTTGAGAAATGTTTGAGAAATGCTAGGATGGACAAAACAAGTGTCCATGATGTTGTCCTTGTAGGAGGTTCTACCAGAATTCCAAAGGTTCAACAATTATTGCAGGATTTCTTTAACGGAAAGGAGCTATGCAATAGCATTAATCCCGACGAGGCTGTTGCGTGTGGTGCTGCAGTTTACGCTGCAATCTTGAGTGGTTGTTGA 4263 0.3892 MTQASLSVSSSLTYDVFISFRGIDTRNNFTRDLYDSLDQNGIHTFFDEKQIQKGEQITPALFQAIQQSRIFIVVFSNNYASSTFCLNELALILDCSNTHGRLLLPVFYDVDPSQVRHQSGAYGEALKKQEERFCDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTPLHVADNPVALESPVLEVASLLGIGSHEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENAINHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGSGSKIIITTRDKHLLAIHEILNIYEVKQLNHEKSLELFNWHAFRNRKMDPCYSDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKISYDDLDEDDKGIFLDIACFYNSDEMSYAKEMLYLHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYNDKEVQWSGEAFKKMKKLKILIIRSARFFRGPQKLPNSLRVLDWSGYPSQSLPIDFNPKKLNILSLHESYLISFKPIKVFESLSFLDFEGCKLLTELPSLSGLLNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVPNINLPSLEILDMRGCSCLKSFPEVLGVMENIRDVYLDQTSIDKLPFSIRNLVGLRRLFLRECMSLTQLTDSIRILPKLEILTAYGCRGFQLFESKEKVGSEVFPKAMLVYKEGSAELLDMSSLNICPDNVIEVISTSILDGNVVLMRKGIAKGRGNWYRHESNESSLRFWFQNKFPRIALCCAVEPPVCKDNMLLDFNLSVLINGTKQFTSSCNYMFSAEKLTEQVLMCDLVCKVERSYLEHEWNQVDISYEFKYSMPCGSKRIMATQEMTTTRNPSWSFIYAYEEDNKVGIRFLSQFVEWVEQHRRNIAYYWFGSVLYTRSFSPLVEKERSIFPELKLKLFNLMVEEIEGPAIGIDLGTTYSCVGVCQHDRVEIIANNQGNRTTPSYVAFTDSDCLIGDTAKNQVASNPINTVFDAKRLIGRRFSDASVQRDMKLWPFKMISGPDEKPLIGVNNFGEDKQFAPEEISSMILWKMREIAEAYVGSAIRNAVVTVPVYFNDSQRQITKDAAVFAGLNVMDIIDEPTAAAIAYGFDMTSVGEKNVLIFDLGGGTFDVSLLTFEESDVEVKVISGDTHLGGEDFNNRMVNHFVQEFKRKNKKDISGNPRALMRLRTACEKAKRTLSFTVQTTIEIDCLFEGIDFCSPITRATFEKLNMDLFRKCMEQVEKCLRNARMDKTSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCNSINPDEAVACGAAVYAAILSGC* 1421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1579 1420 ProSitePatterns Heat shock hsp70 proteins family signature 3. 1371 1385 IPR018181 -
Mtr2g1579 1420 PANTHER HEAT SHOCK PROTEIN 70KDA 1034 1419 IPR013126 GO:0005524|GO:0140662
Mtr2g1579 1420 Gene3D Ribonuclease Inhibitor 687 814 IPR032675 -
Mtr2g1579 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 444 IPR027417 -
Mtr2g1579 1420 Pfam Hsp70 protein 1042 1419 IPR013126 GO:0005524|GO:0140662
Mtr2g1579 1420 Gene3D - 1225 1397 - -
Mtr2g1579 1420 SUPERFAMILY Actin-like ATPase domain 1229 1419 IPR043129 -
Mtr2g1579 1420 CDD AAA 218 346 - -
Mtr2g1579 1420 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1045 1052 IPR018181 -
Mtr2g1579 1420 Pfam TIR domain 14 183 IPR000157 GO:0007165
Mtr2g1579 1420 ProSitePatterns Heat shock hsp70 proteins family signature 2. 1234 1247 IPR018181 -
Mtr2g1579 1420 Gene3D - 350 434 IPR042197 -
Mtr2g1579 1420 Gene3D Actin; Chain A, domain 4 1266 1349 - -
Mtr2g1579 1420 Gene3D - 11 177 IPR035897 -
Mtr2g1579 1420 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Mtr2g1579 1420 SUPERFAMILY L domain-like 536 783 - -
Mtr2g1579 1420 CDD HSPA1-2_6-8-like_NBD 1042 1418 - -
Mtr2g1579 1420 Gene3D - 1043 1415 - -
Mtr2g1579 1420 SMART AAA_5 212 352 IPR003593 -
Mtr2g1579 1420 Gene3D Ribonuclease Inhibitor 523 686 IPR032675 -
Mtr2g1579 1420 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Mtr2g1579 1420 Pfam NB-ARC domain 212 430 IPR002182 GO:0043531
Mtr2g1579 1420 SMART till_3 13 153 IPR000157 GO:0007165
Mtr2g1579 1420 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1034 1419 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1041 1054 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1069 1081 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1091 1099 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1179 1199 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1240 1250 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1368 1384 - -
Mtr2g1579 1420 PRINTS 70kDa heat shock protein signature 1400 1420 - -
Mtr2g1579 1420 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 156 IPR035897 -
Mtr2g1579 1420 Gene3D - 1104 1159 - -
Mtr2g1579 1420 Gene3D - 178 344 IPR027417 -
Mtr2g1579 1420 SUPERFAMILY Actin-like ATPase domain 1042 1224 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1579 Mtr-Chr2 17651890 17658378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1579 1034 1419 Calmodulin-binding Proteins AT3G09440 82.216 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1579 - - mtr:MTR_2g040370 2355.87