Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1578 ATGGAGAATAATCACATGGTGAAGGAGGAAATGGTAGATGAAGAAGAAGTGGTGGAACATGATGAGATTAGTCCCATTGGTGATGGTGAAGATGATGAAGATGTTGTTTCCACCTTAACCATGGAAAGGGTTGCTGCTGCTAAGAAATTCATTGAGAGTCATTATAAGTCTCAAATGAAACACATTCAAGAACGCAAAGAAAGGCGTTCGGTGCTACAAAAGGAGTTAGAATCATCGCATGTACCAGAAGAAGAACAGATCAATTTACTGAAGGATTTAGAGAGCAAAGAGACGGAGTATATGCGGTTGAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGTGAGGTAAGACTCTGCCGCGAGAAGAAATCCGGCAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCGAATGACTGCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGTGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCAAGATTTTACATCGCCCAAACCGTTTTGGCCATCGAGTCTATTCATAAACACAATTACGTTCATCGGGATATAAAACCTGACAACCTTCTATTAGACATAAATGGTCATATGAAATTGTCGGATTTCGGTCTTTGCAAACCTCTTGAAGTCTCAAATCTATCACCTATAAGTGAAAAGGAAATATTGGATGATGATAACTTGAACGATACAATGGACGTTGATGGAAATTACCCGAATAGTAGAAATGGTAGGCGTTGGAAAAGTCCTCTCGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCCACTGTCGGAACTCCAGATTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAGTGTGACTGGTGGTCTCTTGGCGCTATAATGTATGAAATGCTTGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCCGAAAGATTGTCCACTGGAAAAACCACTTAAAATTTCCGGAGGAGGCAAGATTGACACCCGAAGCGAAAGATCTGATGCACAGGTTGCTTTCTGGTGTTCCACATAGGCTTGGAACCAGAGGAGCAAGAGAAATTAAAGATCATCCTTGGTTTAGGGATGTTTTATGGGATAGGCTCTATGAAACCGAGGCTGCATTTAAACCACGAGTCGTAGGGGAACTTGACACTCAGAATTTTATGAAATTCGATGAGGTTGAACAACCAATGCCAGCTCGATCTGGATCCGGACCCATCAGAAAGATGCTTTTTACTCAAGATCTCAGTTTTGTTGGCTATACATATAGGAATTTTGCAGCTGTCAAAGGGAAGCGTCATTCTATTGAAAAGGGAAGCGTGTCACCACGATCATCAGTCGACTCGACACACAGTGATTCTGTAATAAACTATTCCACCTGA 1563 0.4063 MENNHMVKEEMVDEEEVVEHDEISPIGDGEDDEDVVSTLTMERVAAAKKFIESHYKSQMKHIQERKERRSVLQKELESSHVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVANDCIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYVHRDIKPDNLLLDINGHMKLSDFGLCKPLEVSNLSPISEKEILDDDNLNDTMDVDGNYPNSRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLMHRLLSGVPHRLGTRGAREIKDHPWFRDVLWDRLYETEAAFKPRVVGELDTQNFMKFDEVEQPMPARSGSGPIRKMLFTQDLSFVGYTYRNFAAVKGKRHSIEKGSVSPRSSVDSTHSDSVINYST* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1578 520 SMART pkinase_C_6 421 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr2g1578 520 MobiDBLite consensus disorder prediction 494 520 - -
Mtr2g1578 520 CDD STKc_NDR_like 111 484 - -
Mtr2g1578 520 SMART serkin_6 113 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1578 520 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr2g1578 520 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mtr2g1578 520 ProSiteProfiles Protein kinase domain profile. 113 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1578 520 Pfam Protein kinase domain 115 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1578 520 Pfam Protein kinase domain 312 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1578 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 519 - -
Mtr2g1578 520 Gene3D Transferase(Phosphotransferase) domain 1 197 263 - -
Mtr2g1578 520 MobiDBLite consensus disorder prediction 14 33 - -
Mtr2g1578 520 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 20 519 - -
Mtr2g1578 520 MobiDBLite consensus disorder prediction 500 520 - -
Mtr2g1578 520 MobiDBLite consensus disorder prediction 1 33 - -
Mtr2g1578 520 Gene3D Transferase(Phosphotransferase) domain 1 319 438 - -
Mtr2g1578 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Mtr2g1578 520 SUPERFAMILY Protein kinase-like (PK-like) 95 473 IPR011009 -
Mtr2g1578 520 Gene3D Phosphorylase Kinase; domain 1 71 196 - -
Mtr2g1578 520 Gene3D Phosphorylase Kinase; domain 1 439 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1578 Mtr-Chr2 17643444 17662775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1578 10 503 AGC Kinase Gene Family AT2G19400 73.896 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mtr2g1578 Pkinase 7.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1578 K08790 - gmx:100811359 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1578 2 17643444 17662775 Mtr2g1578 2 17643444 17662775 ECH