LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1578	ATGGAGAATAATCACATGGTGAAGGAGGAAATGGTAGATGAAGAAGAAGTGGTGGAACATGATGAGATTAGTCCCATTGGTGATGGTGAAGATGATGAAGATGTTGTTTCCACCTTAACCATGGAAAGGGTTGCTGCTGCTAAGAAATTCATTGAGAGTCATTATAAGTCTCAAATGAAACACATTCAAGAACGCAAAGAAAGGCGTTCGGTGCTACAAAAGGAGTTAGAATCATCGCATGTACCAGAAGAAGAACAGATCAATTTACTGAAGGATTTAGAGAGCAAAGAGACGGAGTATATGCGGTTGAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGTGAGGTAAGACTCTGCCGCGAGAAGAAATCCGGCAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCGAATGACTGCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGTGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCAAGATTTTACATCGCCCAAACCGTTTTGGCCATCGAGTCTATTCATAAACACAATTACGTTCATCGGGATATAAAACCTGACAACCTTCTATTAGACATAAATGGTCATATGAAATTGTCGGATTTCGGTCTTTGCAAACCTCTTGAAGTCTCAAATCTATCACCTATAAGTGAAAAGGAAATATTGGATGATGATAACTTGAACGATACAATGGACGTTGATGGAAATTACCCGAATAGTAGAAATGGTAGGCGTTGGAAAAGTCCTCTCGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCCACTGTCGGAACTCCAGATTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAGTGTGACTGGTGGTCTCTTGGCGCTATAATGTATGAAATGCTTGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCCGAAAGATTGTCCACTGGAAAAACCACTTAAAATTTCCGGAGGAGGCAAGATTGACACCCGAAGCGAAAGATCTGATGCACAGGTTGCTTTCTGGTGTTCCACATAGGCTTGGAACCAGAGGAGCAAGAGAAATTAAAGATCATCCTTGGTTTAGGGATGTTTTATGGGATAGGCTCTATGAAACCGAGGCTGCATTTAAACCACGAGTCGTAGGGGAACTTGACACTCAGAATTTTATGAAATTCGATGAGGTTGAACAACCAATGCCAGCTCGATCTGGATCCGGACCCATCAGAAAGATGCTTTTTACTCAAGATCTCAGTTTTGTTGGCTATACATATAGGAATTTTGCAGCTGTCAAAGGGAAGCGTCATTCTATTGAAAAGGGAAGCGTGTCACCACGATCATCAGTCGACTCGACACACAGTGATTCTGTAATAAACTATTCCACCTGA	1563	0.4063	MENNHMVKEEMVDEEEVVEHDEISPIGDGEDDEDVVSTLTMERVAAAKKFIESHYKSQMKHIQERKERRSVLQKELESSHVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVANDCIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYVHRDIKPDNLLLDINGHMKLSDFGLCKPLEVSNLSPISEKEILDDDNLNDTMDVDGNYPNSRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLMHRLLSGVPHRLGTRGAREIKDHPWFRDVLWDRLYETEAAFKPRVVGELDTQNFMKFDEVEQPMPARSGSGPIRKMLFTQDLSFVGYTYRNFAAVKGKRHSIEKGSVSPRSSVDSTHSDSVINYST*	521

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr2g1578	520	SMART	pkinase_C_6	421	485	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Mtr2g1578	520	MobiDBLite	consensus disorder prediction	494	520	-	-
Mtr2g1578	520	CDD	STKc_NDR_like	111	484	-	-
Mtr2g1578	520	SMART	serkin_6	113	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1578	520	ProSiteProfiles	AGC-kinase C-terminal domain profile.	421	493	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Mtr2g1578	520	ProSitePatterns	Protein kinases ATP-binding region signature.	119	142	IPR017441	GO:0005524
Mtr2g1578	520	ProSiteProfiles	Protein kinase domain profile.	113	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1578	520	Pfam	Protein kinase domain	115	263	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1578	520	Pfam	Protein kinase domain	312	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1578	520	PANTHER	SERINE/THREONINE-PROTEIN KINASE	20	519	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g1578	Mtr-Chr2	17643444	17662775	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g1578	10	503	AGC Kinase Gene Family	AT2G19400	73.896	0.0	761

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Mtr2g1578		Pkinase	7.8e-43	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1578	K08790		-	gmx:100811359	848.58

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g1578	2	17643444	17662775	Mtr2g1578	2	17643444	17662775	ECH

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