LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1570	ATGGAACGTCGCGTTGGGAATAAGTTTCGTGTTGGTCGTAAGATCGGTAGTGGCTCATTCGGAGAGATCTATTTAGGTACTAACATTGTAACTAATGAAGATGTTGCAATTAAGCTTGAAAATGTCAGGACAAAGAATCCTCAGCTGCTGTATGAGTCCAAGTTGTACAGAATGCTGCAGGGAGAGCCCGGGATTCCAAATATTAAATGGTTTGGAGTCGAGGGAGATTACAATGTTCTAGTAATGGATCTGCTTGGACCTAGTCTTGAAGAGATGTTTAACTTCTGTAGCAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGAGCAAATGATCAAACGTGTTGAGTTTGTTCATTCTAAATCGCTTCTCCACCGGGATATTAAACCAGATAATTTTCTCATGGGCTTGGGAAAGCGGGAAAATCAGGTTTACTGTATTGATTTTGGTTTAGCGAAGAAATATAGAGATAGTACGACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAGTCAGTTGGTTATGTCTTGATGTACTTCCTGAGGGGAAGTCTTCCTTGGCAAGGGCTTCAAGCACGAACCAAGAGAGAAAAGTACGAGAAGATCAGTGAAAAGAAGGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTATTGCCGGTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGTGACCTGTTTATTCGTGAAGGGTTCCAGTCTGATTACATCTTTGATTGGACTATCTTGAAGTATCAGCAAGCACAGCTAATCACTCCTCCAGCACGTGCTATTGGGCTTAATGCTGGAACCAGTTCTGGAATCCCTCCTGCTATGGCTAGTGCTAATAGACACACAGGAAGGGAAGAAGGGCGTCATTCTGGTATGGTTTCAGTAAATTCTTCAAGGCGAAGAATGTCTGGACCCATATTAAATTCTGTAAATATTTCAAACCAGAGAAACCCAGGCCCTGGTGATGCTGCTATTAGTAGGGATGTTATGTTATCAAGTGCAAATGTCTTGGGCGAGTCGAGTGGATCAAGGCGGCTTCATGGTAGTAGTAGCCGCAATGCATATGGTGGCGCTGATTCAAATTTTCGTGCTCGTGCTACTGAAGATATCAATGGAAAAGCCATAAATTCAAGTGGACAAAGAATTTCACAAAGTGGACCTTTAGATCCAAGGAGAGTAACATCTTCTAGAAATAGTTCTCATATCAATAATTATGAAACTGCACTCAAGAGCATGGAGGGTTTGAAATTAAAAAATGTTGATTCCCATCAATAA	1416	0.4131	MERRVGNKFRVGRKIGSGSFGEIYLGTNIVTNEDVAIKLENVRTKNPQLLYESKLYRMLQGEPGIPNIKWFGVEGDYNVLVMDLLGPSLEEMFNFCSRKLSLKTVLMLAEQMIKRVEFVHSKSLLHRDIKPDNFLMGLGKRENQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESVGYVLMYFLRGSLPWQGLQARTKREKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQSDYIFDWTILKYQQAQLITPPARAIGLNAGTSSGIPPAMASANRHTGREEGRHSGMVSVNSSRRRMSGPILNSVNISNQRNPGPGDAAISRDVMLSSANVLGESSGSRRLHGSSSRNAYGGADSNFRARATEDINGKAINSSGQRISQSGPLDPRRVTSSRNSSHINNYETALKSMEGLKLKNVDSHQ*	472

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr2g1570	471	Pfam	Protein kinase domain	10	224	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1570	471	ProSiteProfiles	Protein kinase domain profile.	9	278	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1570	471	MobiDBLite	consensus disorder prediction	418	451	-	-
Mtr2g1570	471	PANTHER	CASEIN KINASE-RELATED	1	452	-	-
Mtr2g1570	471	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
Mtr2g1570	471	MobiDBLite	consensus disorder prediction	322	343	-	-
Mtr2g1570	471	MobiDBLite	consensus disorder prediction	386	404	-	-
Mtr2g1570	471	Gene3D	Transferase(Phosphotransferase) domain 1	1	307	-	-
Mtr2g1570	471	SMART	serkin_6	9	278	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr2g1570	471	MobiDBLite	consensus disorder prediction	386	451	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g1570	Mtr-Chr2	17539221	17548096	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g1570	7	153	CBL-interacting serine-threonine protein kinases	AT2G25090	31.613	1.40e-12	67.8

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Mtr2g1570		Pkinase	5.4e-27	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1570	K02218		-	gmx:100784627	704.516

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g4652	4	60490711	60498477	Mtr2g1570	2	17539221	17548096	PCT

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