Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1570 ATGGAACGTCGCGTTGGGAATAAGTTTCGTGTTGGTCGTAAGATCGGTAGTGGCTCATTCGGAGAGATCTATTTAGGTACTAACATTGTAACTAATGAAGATGTTGCAATTAAGCTTGAAAATGTCAGGACAAAGAATCCTCAGCTGCTGTATGAGTCCAAGTTGTACAGAATGCTGCAGGGAGAGCCCGGGATTCCAAATATTAAATGGTTTGGAGTCGAGGGAGATTACAATGTTCTAGTAATGGATCTGCTTGGACCTAGTCTTGAAGAGATGTTTAACTTCTGTAGCAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGAGCAAATGATCAAACGTGTTGAGTTTGTTCATTCTAAATCGCTTCTCCACCGGGATATTAAACCAGATAATTTTCTCATGGGCTTGGGAAAGCGGGAAAATCAGGTTTACTGTATTGATTTTGGTTTAGCGAAGAAATATAGAGATAGTACGACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAGTCAGTTGGTTATGTCTTGATGTACTTCCTGAGGGGAAGTCTTCCTTGGCAAGGGCTTCAAGCACGAACCAAGAGAGAAAAGTACGAGAAGATCAGTGAAAAGAAGGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTATTGCCGGTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGTGACCTGTTTATTCGTGAAGGGTTCCAGTCTGATTACATCTTTGATTGGACTATCTTGAAGTATCAGCAAGCACAGCTAATCACTCCTCCAGCACGTGCTATTGGGCTTAATGCTGGAACCAGTTCTGGAATCCCTCCTGCTATGGCTAGTGCTAATAGACACACAGGAAGGGAAGAAGGGCGTCATTCTGGTATGGTTTCAGTAAATTCTTCAAGGCGAAGAATGTCTGGACCCATATTAAATTCTGTAAATATTTCAAACCAGAGAAACCCAGGCCCTGGTGATGCTGCTATTAGTAGGGATGTTATGTTATCAAGTGCAAATGTCTTGGGCGAGTCGAGTGGATCAAGGCGGCTTCATGGTAGTAGTAGCCGCAATGCATATGGTGGCGCTGATTCAAATTTTCGTGCTCGTGCTACTGAAGATATCAATGGAAAAGCCATAAATTCAAGTGGACAAAGAATTTCACAAAGTGGACCTTTAGATCCAAGGAGAGTAACATCTTCTAGAAATAGTTCTCATATCAATAATTATGAAACTGCACTCAAGAGCATGGAGGGTTTGAAATTAAAAAATGTTGATTCCCATCAATAA 1416 0.4131 MERRVGNKFRVGRKIGSGSFGEIYLGTNIVTNEDVAIKLENVRTKNPQLLYESKLYRMLQGEPGIPNIKWFGVEGDYNVLVMDLLGPSLEEMFNFCSRKLSLKTVLMLAEQMIKRVEFVHSKSLLHRDIKPDNFLMGLGKRENQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESVGYVLMYFLRGSLPWQGLQARTKREKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQSDYIFDWTILKYQQAQLITPPARAIGLNAGTSSGIPPAMASANRHTGREEGRHSGMVSVNSSRRRMSGPILNSVNISNQRNPGPGDAAISRDVMLSSANVLGESSGSRRLHGSSSRNAYGGADSNFRARATEDINGKAINSSGQRISQSGPLDPRRVTSSRNSSHINNYETALKSMEGLKLKNVDSHQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1570 471 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1570 471 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1570 471 MobiDBLite consensus disorder prediction 418 451 - -
Mtr2g1570 471 PANTHER CASEIN KINASE-RELATED 1 452 - -
Mtr2g1570 471 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr2g1570 471 MobiDBLite consensus disorder prediction 322 343 - -
Mtr2g1570 471 MobiDBLite consensus disorder prediction 386 404 - -
Mtr2g1570 471 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Mtr2g1570 471 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1570 471 MobiDBLite consensus disorder prediction 386 451 - -
Mtr2g1570 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr2g1570 471 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mtr2g1570 471 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 452 IPR030509 GO:0004672|GO:0005524
Mtr2g1570 471 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1570 Mtr-Chr2 17539221 17548096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1570 7 153 CBL-interacting serine-threonine protein kinases AT2G25090 31.613 1.40e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr2g1570 Pkinase 5.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1570 K02218 - gmx:100784627 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4652 4 60490711 60498477 Mtr2g1570 2 17539221 17548096 PCT