Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1566 ATGATGTACTTGAGAAGTGGATTCTCTGAATATTCAAACGAAATCAGCAACAATACTAGCAGTGAGTTATGCTGCACAACAGCACCAAATTCAACCATTACTGCTTCACAAGATGTCATCACATTCACACAACCACTCAACCGTCTCTCAGACAATCTAGCTTCAATACTAGATGATACAGGGTTTGACTTCTTTTCCGACGCAAAGATCATCGCCAAAGATGGTCGAGAAGTTTCCGTGCACCGGTGCATTTTATCGGCGAGGAGTAGTTTCTTTAAGGATGTGTTTAAGGGAAAGAAAGAAACGACGCTGCAACTGAAGGAAGTTGCTAAGGATTATGATGTTGGGTTTGACGCGCTTAACGTTGTTCTGCGTTATTTGTATAGTGAGAGAGTTGAGGATCATCATTTGTCTGCTAAAGATGTTTGTGTTTGTGTGGATGATGATTGTTTACACTTTGGTTGTTGGCCAGTTGTTGATTTCATGCTTCAACTTCTCTATGCTTCCTTCACCTTTCAAATTTCTGAATTGCTTGCTCTTTACCAAGATCATCTACTAGACATTCTTGACAAAATGGCGATAGATGACATGTTGGTGGTTCTTTCTATAGCAAACATTTGTGGTAAAACATGTGATAAACTACTAAAAAGATGTACAGATATAATAGTTGAATCCAATGTTGATATAACCACTCTTGAAAAATCACTGCCTCAATCTATAGTGAAACTAGTAACATACAAACGCAAACAACTAGGTTTAGACATGTATGAAACCGTAAATCTTCTAGACAAACATGTCACCAGAATACATAGAGCTTTAGATTCAGATGATGTAGAATTAGTAAGGTTGCTTTTGAAAGAAGGACACACTACTCTAGATGAGGCTCATGCACTTCACTATGCTGTTGCATATTGTGATGTCAAAACCACTACCGAGCTTCTTGATCTTGGACTTGCTGATGTAAATCATAAAAACCTTAGGGGATACAGCGTGCTACATGTTGCTGCTAAGAGAAAAGAACCGAAAATTATTGTATCTTTGTTAACGAAGGGAGCTCAACCTTCTGAACTCACTATGGATGGCAGAAAAGCTCTTCAGATTTCAAAACGTTGTACGAAAGCTGTGGATTATTATAAATCTACTGAGGAAGGAAAAGTTTCTTCGAATGATCGATTGTGCATAGAGATATTGGAGCAAGCTGAGAGAAGGGAGCCTTTACATGGGGAGGCATCTCTTTCTCTTGCTAAGGCAGGGGATGATTTGCGTATGAAATTGTTGTACCTGGAAAACCGAGTTGGATTGGCAAAACTTTTGTTTCCCATGGAAGCAAAGGTTGTGATGGATATCACTCCAATTGATGGCACATCTGAATTTACTCCAAATTTGGGTGGTTACCAGAGGACAACTATGGACTTGAATGAGGCACCTTTTAAAATAAAAGAGGAGCATCTAATTCGGATGAAGGCATTGTCTAGAGCAGTGGAGTTAGGGAAACGGTTCTTCCCTCGTTGCTCGGAAGTGTTGAACAAGATCATGGATGCCGATGACCTATCGCAGCTTGCATGCATGGGTCATGACAGTCCTGAAGATCGACAAGTGAAGCGCAGACGATACGCGGAGCTACAAGAAGTTCTTAATAAGGTCTTCCATGAGGACAAAGAGGAGTTTGATAAATCTGGCATGTCTTCATCATCCTCATCCACGTCAATAGGAATGCCAAGGGCTAATAATAGTATGATAGCCATGAATCATTGA 1755 0.4011 MMYLRSGFSEYSNEISNNTSSELCCTTAPNSTITASQDVITFTQPLNRLSDNLASILDDTGFDFFSDAKIIAKDGREVSVHRCILSARSSFFKDVFKGKKETTLQLKEVAKDYDVGFDALNVVLRYLYSERVEDHHLSAKDVCVCVDDDCLHFGCWPVVDFMLQLLYASFTFQISELLALYQDHLLDILDKMAIDDMLVVLSIANICGKTCDKLLKRCTDIIVESNVDITTLEKSLPQSIVKLVTYKRKQLGLDMYETVNLLDKHVTRIHRALDSDDVELVRLLLKEGHTTLDEAHALHYAVAYCDVKTTTELLDLGLADVNHKNLRGYSVLHVAAKRKEPKIIVSLLTKGAQPSELTMDGRKALQISKRCTKAVDYYKSTEEGKVSSNDRLCIEILEQAERREPLHGEASLSLAKAGDDLRMKLLYLENRVGLAKLLFPMEAKVVMDITPIDGTSEFTPNLGGYQRTTMDLNEAPFKIKEEHLIRMKALSRAVELGKRFFPRCSEVLNKIMDADDLSQLACMGHDSPEDRQVKRRRYAELQEVLNKVFHEDKEEFDKSGMSSSSSSTSIGMPRANNSMIAMNH* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1566 584 ProSiteProfiles BTB domain profile. 66 136 IPR000210 GO:0005515
Mtr2g1566 584 MobiDBLite consensus disorder prediction 560 584 - -
Mtr2g1566 584 SUPERFAMILY Ankyrin repeat 259 370 IPR036770 -
Mtr2g1566 584 CDD BTB_POZ_NPR_plant 47 189 - -
Mtr2g1566 584 ProSiteProfiles Ankyrin repeat region circular profile. 327 353 - -
Mtr2g1566 584 Pfam Ankyrin repeats (many copies) 296 341 IPR002110 GO:0005515
Mtr2g1566 584 Gene3D - 246 444 IPR036770 -
Mtr2g1566 584 Pfam NPR1/NIM1 like defence protein C terminal 369 568 IPR021094 -
Mtr2g1566 584 SUPERFAMILY POZ domain 41 187 IPR011333 -
Mtr2g1566 584 Pfam BTB/POZ domain 64 141 IPR000210 GO:0005515
Mtr2g1566 584 PANTHER REGULATORY PROTEIN NPR2 3 578 - -
Mtr2g1566 584 SMART ANK_2a 327 356 IPR002110 GO:0005515
Mtr2g1566 584 SMART ANK_2a 264 292 IPR002110 GO:0005515
Mtr2g1566 584 SMART ANK_2a 293 323 IPR002110 GO:0005515
Mtr2g1566 584 PANTHER REGULATORY PROTEIN NPR3 3 578 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mtr2g1566 584 SMART BTB_4 66 189 IPR000210 GO:0005515
Mtr2g1566 584 MobiDBLite consensus disorder prediction 555 584 - -
Mtr2g1566 584 Gene3D Potassium Channel Kv1.1; Chain A 29 224 IPR011333 -
Mtr2g1566 584 ProSiteProfiles Ankyrin repeat profile. 327 359 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1566 Mtr-Chr2 17504987 17507943 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr2g1566 NPR1_like_C 3.3e-85 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1566 K14508 - gmx:100800032 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1566 2 17504987 17507943 Mtr2g1566 2 17504987 17507943 ECH