Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1565 ATGGCTAGTAGCAGCAAATCAACTTCAGCTCTTGTGACTTCTTCAAAGAAAAATCATTATGATGTGTTTGTCACCTTTAGAGGTGAAGATACTCGCAACAATTTCACTGATTTTCTTTTTGACGCCCTTGAAAGAAAAGACATTTTTGCATTTCGAGATGACACTAATCTTCAAAAAGGTGAATCCATAGGATCTGAGCTTCTTCGAGCAATAGAAGGATCTCAGGTTTTTGTTGCGGTTTTCTCAAGATACTATGCTTCCTCAACATGGTGTTTGGAAGAATTAGAAAAGATATGTGAATGCGTTCAGGTGCCAGGAAAACATGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATCATGAAGCTTTTGTCAAACATGAACAAAGATTCCAACAAGACCTTCAGAAGGTGTCAAGATGGAGGGAAGCTCTAAAGCAAGTGGGGAGTATCGCTGGTTGGGATCTACGTGATAAGCCACAATGTGCAGAGATTAAAAAGATTGTTCAAAAGATAATGAATATATTGGAATGCAAATCTTCATGTAATTCAAAAGATTTAGTTGGGATAAATTCTCGTATAGAAGCATTAAAAAATCATTTACTTTTGGACTCGGTTGATGGTGTTCGTGCTATAGGAATTTGGGGGATGGGAGGAATAGGGAAGACAACCCTTGCTTTGGATTTATATGGCCAAATCTCTCATCGATTTGATGCATCTTGTTTCATTGATGATGTAAGCAAAATTTATAGATTACATGATGGTCCACTTGAAGCACAAAAGCAAATCATATTTCAAACTCTTGGCATAGAACACCATCAAATATGCAATCGTTACAGTGCAACATATTTGATACGGCATAGACTATGTCATGAAAGGGCACTTCTGATTCTTGATAATGTGGATCAAGTTGAACAATTGGAAAAAATAGATGTGCATCTTGAATGGTTAGGTGCAGGTAGTAGAATCATTATCATTTCTAGAGATGAGCATATATTGAAAAAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTTTTGAATTGGAGAGATTCTTACAAGTTATTTTGTCGAAAAGCTTTCAAAGTTGAGAACATTATTATGAGTAATTATCAAAATTTGGCAAATGAGATACTGAGATATGCTAATGGTCTACCACTAGCAATTAAAGTAATGGGCTCATTTTTGTTTGGTTGTAATGTGACTGAATGGAAGAGTGCATTGGCTAGATTGAGAGAGAGTCCAGATAAAGATGTCATAGACGTGCTGCAATTAAGTTTTGATGGGCTAAAGCATACTGAAAAGGAAATATTTCTTGATATTGCTTGTTTTTTCAACTCTGAATGTGAGAAATATGTTAAAAACATTCTTAATTGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTAATAAATCACTTATAAGCATTAATGGTCAAAACATTGAAATGCATTCTTTGTTGGAAGAGCTGGGCAGAAAAATTGTGCAAAATAGTTCAAGCAATGACCCAAGAAAATGGAGCAGGTTGTGGTCTACAGAACAACTCTATGATGTTATTATGGCGAAAATGGAAAAGCATGTTGAAGCCATAGTTTTGAAATATACTGAAGAGGTGGACGCTGAACATTTGTCAAAAATGAGTAATCTTAGATTGCTCATCATCGTCAACCATACTGCAACTATCTCAGGATTCCCAAGTTGTCTTTCGAACAAATTAAGATATGTTGAGTGGCCTAAATATCCTTTCAAGTATTTGCCAACAAGTTTTCACCCCAATGAACTAGTAGAATTGATTTTGGATGGGAGCAACATTAAAAACCTATGGAAAAACAAGAAGTATCTTCCCAATTTGAGAAGATTGGATCTAAGTGACTCTAGAAAGCTAGAAAAGATAATGGATTTTGGAGAGTTCCCAAATCTTGAGTGGTTAAATTTGGAAGGATGTGAAAGACTTGTGGAATTGGATCCATCAATTGGACTTCTAAGAAAGCTTGTTTACTTGAACTTAAAAGATTGCTATAATCTAGTAAGCATACCCAACAACATATTCTGTCTTAGCTCTCTTGAATATCTAAATATGCGATGTTGTTTCAAAGTGTTTACAAATTCAAGGCATTTGACGACGCCTGGTATAAGTGAAAGTGTACCACGTGTCCGATCAACGTCTGGTGTCTTTAAACACGTCATGTTGCCTCACCATTTGCCATTTTTGGCTCCCCCAACAAACACATATTTGCATAGCTTATATTGTTTGCGTGAAGTTGACATTAGTTTTTGCCGTCTAAGCCAAGTGCCGGATACAATTGAATGTTTACATTGGGTAGAAAGATTAAATTTAGGGGGAAATGATTTTGCGACACTACCTAGCCTGAGGAAGCTTTCGAAACTTGTATATTTAAATTTGCAGCATTGCAAGTTGTTGGAATCTTTGCCTCAACTTCCTTTTCCTACCGCTATCGGGCGGGAACGAGTTGAGGGCGGATATTACCGGCCTACAGGATTGTTCATCTTCAACTGTCCAAAATTGGGTGAGAGGGAATGTTACAGTAGCATGACATTTTCATGGATGATGCAATTCATTAAGGCAAACCCTTTCTATTTGAATAGGATTCATATTGTTAGTCCAGGAAGCGAAATACCAAGTTGGATCAACAATAAGAGCGTGGGTGATTCAATAAGAATAGACCAATCTCCTATTAAGCATGACAATAATATCATTGGTTTTGTATGTTGTGCAGTATTTTCCATGGCACCTCATCGTGGGAGGTTTCCATCGTCGGCCCATATGGAACTGGTTTTGAAATATCCATTTAATAAGCGTAAGTCAGATAAGTCTCTGAGTAGAATAACTGTGAGTGTTCCGGTAATTCTCAATGGAAGTCTTGTTACGATAACAACCAAATCAAGTCACATATGGATAATCTACTTCCACTGTGAGTCCTATCATGCATTTCGAGAAATCCGTTTTGAAATTTTTGAGGGGCAAGCTTTGGGTATGGAGGTGAAGAGTTGCGGGTATCGTTGGGTATGTAAACAAGACCTACAAGAGTTCAACTTAACAATGATGAATCACGAAAAAACCTTGGCTCAGAAGTGCAAGATTTTGGCAATTGAAGATGAGACACAACCAGAACAAGAATCATTCATCTCACAAGTCATAACTACTTCACAAAGAAGAAAGTCAACAAGTGATAACAAATCAACTGCAACAACAATCTCTGTTGTCAACAACAAGCAAAGAAAAAAATCTCGAACCGCCATATCAGCCACAGAAGCAGAAGTATCTGTGGAGGTACCAGATTCACCTGTTACAGATGAAGTTTCTACTGAATCTCCACAGAAAAAAATCTTGAACCTCCATATCATTGGTCGATTCATTGGTCAGTTCCTCAACAACTGTTGCCAACAAGGTAGCACTGATACAGACATGGACACCGGATACGACACGGACACTATAAATTCAGATGCTAAAAGTTTGGTTTCTGAAGAAGACTTAGATGCTGTAAATTCAATTATTGAAGACCTCAACAACTGTTGCCAACAAGGTAGCACGGATACGGACATGGACACCGGATACAACACAGACACTGTAAATTCAGATGCTGAAAGTTTGGTTTTTGAAGAGGACTTAGATGCTGTAAATTCAATTATTGAAAAGACTATTCAGACAGATATTGCAACAAGCAATGTCGAAACTGACTCACCGGTTGAAGTGGCTGATGAAAGTCTTGATAATTTAGAGTTAAGGAAGAAGTTCCAACTGCAACTGAGACAGACAGCGATGTAG 3819 0.3739 MASSSKSTSALVTSSKKNHYDVFVTFRGEDTRNNFTDFLFDALERKDIFAFRDDTNLQKGESIGSELLRAIEGSQVFVAVFSRYYASSTWCLEELEKICECVQVPGKHVLPVFYDVDPSEVRKQSGIYHEAFVKHEQRFQQDLQKVSRWREALKQVGSIAGWDLRDKPQCAEIKKIVQKIMNILECKSSCNSKDLVGINSRIEALKNHLLLDSVDGVRAIGIWGMGGIGKTTLALDLYGQISHRFDASCFIDDVSKIYRLHDGPLEAQKQIIFQTLGIEHHQICNRYSATYLIRHRLCHERALLILDNVDQVEQLEKIDVHLEWLGAGSRIIIISRDEHILKKYGVDVVYKVPLLNWRDSYKLFCRKAFKVENIIMSNYQNLANEILRYANGLPLAIKVMGSFLFGCNVTEWKSALARLRESPDKDVIDVLQLSFDGLKHTEKEIFLDIACFFNSECEKYVKNILNCCGFHADIGLRVLINKSLISINGQNIEMHSLLEELGRKIVQNSSSNDPRKWSRLWSTEQLYDVIMAKMEKHVEAIVLKYTEEVDAEHLSKMSNLRLLIIVNHTATISGFPSCLSNKLRYVEWPKYPFKYLPTSFHPNELVELILDGSNIKNLWKNKKYLPNLRRLDLSDSRKLEKIMDFGEFPNLEWLNLEGCERLVELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKVFTNSRHLTTPGISESVPRVRSTSGVFKHVMLPHHLPFLAPPTNTYLHSLYCLREVDISFCRLSQVPDTIECLHWVERLNLGGNDFATLPSLRKLSKLVYLNLQHCKLLESLPQLPFPTAIGRERVEGGYYRPTGLFIFNCPKLGERECYSSMTFSWMMQFIKANPFYLNRIHIVSPGSEIPSWINNKSVGDSIRIDQSPIKHDNNIIGFVCCAVFSMAPHRGRFPSSAHMELVLKYPFNKRKSDKSLSRITVSVPVILNGSLVTITTKSSHIWIIYFHCESYHAFREIRFEIFEGQALGMEVKSCGYRWVCKQDLQEFNLTMMNHEKTLAQKCKILAIEDETQPEQESFISQVITTSQRRKSTSDNKSTATTISVVNNKQRKKSRTAISATEAEVSVEVPDSPVTDEVSTESPQKKILNLHIIGRFIGQFLNNCCQQGSTDTDMDTGYDTDTINSDAKSLVSEEDLDAVNSIIEDLNNCCQQGSTDTDMDTGYNTDTVNSDAESLVFEEDLDAVNSIIEKTIQTDIATSNVETDSPVEVADESLDNLELRKKFQLQLRQTAM* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1565 1272 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 162 IPR035897 -
Mtr2g1565 1272 Pfam NB-ARC domain 201 423 IPR002182 GO:0043531
Mtr2g1565 1272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 627 IPR044974 GO:0006952
Mtr2g1565 1272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 637 823 IPR044974 GO:0006952
Mtr2g1565 1272 SMART till_3 19 159 IPR000157 GO:0007165
Mtr2g1565 1272 PRINTS Disease resistance protein signature 219 234 - -
Mtr2g1565 1272 PRINTS Disease resistance protein signature 296 310 - -
Mtr2g1565 1272 PRINTS Disease resistance protein signature 390 404 - -
Mtr2g1565 1272 PRINTS Disease resistance protein signature 623 639 - -
Mtr2g1565 1272 Pfam C-JID domain 886 1025 IPR045344 -
Mtr2g1565 1272 Gene3D - 184 349 IPR027417 -
Mtr2g1565 1272 Gene3D - 18 183 IPR035897 -
Mtr2g1565 1272 Gene3D Ribonuclease Inhibitor 525 726 IPR032675 -
Mtr2g1565 1272 Gene3D Ribonuclease Inhibitor 731 896 IPR032675 -
Mtr2g1565 1272 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Mtr2g1565 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr2g1565 1272 Gene3D - 355 439 IPR042197 -
Mtr2g1565 1272 ProSiteProfiles TIR domain profile. 18 181 IPR000157 GO:0007165
Mtr2g1565 1272 SUPERFAMILY L domain-like 554 824 - -
Mtr2g1565 1272 Pfam TIR domain 20 196 IPR000157 GO:0007165
Mtr2g1565 1272 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 627 - -
Mtr2g1565 1272 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 637 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1565 Mtr-Chr2 17473055 17479238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1565 15 830 WRKY Transcription Factor Family AT4G12020 29.537 7.74e-81 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1565 - - mtr:MTR_6g488300 1608.19