Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1556 ATGAGTCCTTCCAGAATTTTCTTCCTCTTCTGCTTCTTCTTTAGAACTTCCTCTTCCGATATATTAGATACCATCACACAGAAAGGAAAATTTCCGTCTTGGGTTAAACCAGGTGATAGGAAGCTTCTACAGGCGAGTGCGGTGCCTGCAGATGCCGTGGTAGCATCTGATGGGAGTGGAAACTATATGAAGATTATGGATGCTGTGATGGCAGCACCTAATGGAAGCAAGAAGCGCTATGTAATACACATCAAGAAAGGTGTTTACAATGAGCATGTTATGATCAACAATAGCAAGTCCAATCTCATGATGATCGGAGATGGTATGGGTGCCACTGTCATCACCGGTGACTTAAGCTGGGGGAGAGATAAGTTAGACACATCCTATACTTATACCTTTGGTGTTGAGGGTCTAGGTTTCAGTGCTCAGGACATTTCCTTCAGGAACACCGCATGGCCTGAAAATCATCAAGCAGTGGCACTATTGTCAGACTCAGACACCTCTGTCTTTTACCGATGTGAAATCTCTGGTTTTCAAGACAGTTTGTGTGCGAACATCAAACACCATTCTATAAGAATTGCAAAATCAGAGGCTCGGTTGACTTCATATTTGGTTAGGCAGTTGTCGTCTTTCAAGACTGACATATTGGTAAGGAAAGGACCAACAGGCCAACAGAACACCATCACTGCTCAAGGAGGACCAGAGAAACCTAATCTACCATTTGGTTTCGCGTTTCAGTTCTGCAACGTCTGTGCTGATCCTGAATTTCTTCCTTTCGTAAATCTACCCAAACATTCCTCGGAAGACCGTCGAAGACTCGAAGCCTTACTCACGAGTAGCATTCATGCAGTCCTAAATCAGTGA 864 0.4398 MSPSRIFFLFCFFFRTSSSDILDTITQKGKFPSWVKPGDRKLLQASAVPADAVVASDGSGNYMKIMDAVMAAPNGSKKRYVIHIKKGVYNEHVMINNSKSNLMMIGDGMGATVITGDLSWGRDKLDTSYTYTFGVEGLGFSAQDISFRNTAWPENHQAVALLSDSDTSVFYRCEISGFQDSLCANIKHHSIRIAKSEARLTSYLVRQLSSFKTDILVRKGPTGQQNTITAQGGPEKPNLPFGFAFQFCNVCADPEFLPFVNLPKHSSEDRRRLEALLTSSIHAVLNQ* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1556 287 Pfam Pectinesterase 51 258 IPR000070 GO:0030599|GO:0042545
Mtr2g1556 287 Gene3D - 45 262 IPR012334 -
Mtr2g1556 287 ProSitePatterns Pectinesterase signature 1. 76 95 IPR018040 -
Mtr2g1556 287 PANTHER PECTINESTERASE 22 262 - -
Mtr2g1556 287 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 22 262 - -
Mtr2g1556 287 SUPERFAMILY Pectin lyase-like 46 258 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1556 Mtr-Chr2 17356994 17357964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1556 30 261 Carbohydrate Esterase AT3G43270 51.261 2.09e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1556 K01051 - zju:107423846 226.868