Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1541 ATGGCTGCTGAATTTGTTGGCGGTGCAATTGTTAATTCAATCATTCAGGTCTTGGTTGATAAGTTAGCTTCAACCGAAATGATGGATTATTTTCGAACTAAACTCGATGGGAATTTGCTGATGAAATTAAACAATAGTTTGATTTCCATCAATGCTGTTGTTGAATATGCTGAGCAGCAGCAGATCAGAAGATCTACTGTGAGGACATGGATTTGTAATGTCAAAGATGCTATAATGGATGCTGAGGATGTTCTTGATGAAATCTACATACAGAATTTGAAGTCCAAGCTTCCTTTTACTTCTTATCACAAGAATGTTCAATCCAAATTACAAGATATTGCTGCAAACCTAGAACTTCTAGTGAACATGAAGAATACCCTTTCGTTGAATGATAAAACTGCTGCTGATGGTTCTACTCTCTGCTCACCGATCATTCCAACTAATCTACCTCGTGAGCCTTTTATTTATGGCAGGGATAATGAGAAAGAACTTATTTCTGATTGGCTAAAATTTAAAAATGATAAGCTCTCTGTAATTTCCCTCGTTGCTATGGGGGGTATGGGTAAAACTACTCTTGCGCAACATTTGTTTAATGATCCTAGCATCCAGGAAAATTTTGATGTTTTAGCTTGGGTACATGTTTCTGGTGAATTTAATGCTCTTCAAATAATGAGGGACACTCTTGCAGAAATCAGTGGTTCATACCTTAATGATACTAATTTCACTCTGGTTCAACGTAAGGTAGCAAATGAACTGAATGGGAAGAAGTTTTTTATTGTTTTGGACAATATGTGGAATGACAACGAAGTGGAATTGAAAGATTTGAAGATTCCATTTCAGTGTGGGGCTGAGGGAAGTAAAATCCTTGTCACTACGCGCAAAAGTGAAGTTGCTTCAGGCATGGAGTCAGATCATACTCATCTTCTACAAAAATTAGAAGAAGAACATGCATGGGACTTGTTTTCCAAACATGCATTCAAAAATCTAGAGAGTTCTCGAATAACCATTGGCCCAGGAGTTTTTGAGTTAATTGCCGAAGATGTCATGAGGAAATGTAACGGATTACCTTTAGCTTTGGAAGCAATTGGGCGTCTCTTGAGCGTACATTCATCCTTCAAGGACTGGAGTGAGATATCGAAAAGCGGTATATGGAACTTACCAGGAGAAACACGAATTGTCCCTGCTTTGATGTTAAGTTATCAAAAGCTTCCATATGATCTTAAGAGATGTTTTGGGTACTGTGCATTATTCCCTAAAGGCTACCTATTTGACAAGGATGATTTAATTTTACTATGGACGGCTGAAAACTTTCTCCCTGGACAAAAGAAGGGTGAAAACTTTCTCCCTGGACAAAAGAAGGGTGAGTCGTACTTTAACCATCTACTGTCAATATCATTTTTCCAACCATCAGAAAAATATAAAAATTATTTTATCATGCATGATTTATTTCATGACTTAGCTGAAACTGTGTTTGGGGATTTTTGCTTAACATTGGGAGCCGAAAGAGGGAAAAATATATCAGGGATAACTCGTCATTTTTCATTTGTATGTGATAAAATTGGATCTTCAAAAGGGTTCGAGACCTTATATACAGATAATAAGTTGTGGACATTTATACCACTGTCTATGAATTCTTACCAACATCGTTGGTTGTCGCCCTTGACGTCATTGGAGCTTCCAAAGTTGTTCTTGAAATGTAAGTTGTTGCGTGTATTGTCATTGTGCGGATACATGGATATGGTGGAGTTGCCGGATACAGTAAGAAATCTTATACACCTCCGTCATCTCGACCTTTCCCGGACTGGGATAAGAAATTTGCCGGATTCTTTATGCTCCCTCCTTTACTTGCAAACATTGAAGGTGAAGGATTGTGAGTATTTGGAAGAGCTGCCTGTGAATTTACACAAACTGGTGAAATTGTCTTATCTTGACTTTAGTGGAACTAAGGTTACAAGAATGCCAATCCAAATGGATAGACTACAAAATCTTCAAGTTCTTAGTTCCTTTTATGTGGACAAGGGCAGTGAGTCCAATGTGAAACAGTTAGGAGATCTCACTCTACATGGAGATCTGTCCATTTTCGAGCTACAGAATATTACTAATCCATCAGATGCAGCTCTGGCAGATATGAAAAGTAAATCTCATCTTTTGAAACTAAATTTAAGGTGGAACGCTACTAGTACCAGTTCAAAAAATGAAAGGGAGGTGCTCGAGAACCTTAAACCTTCCATACATTTGACAACGCTCTCAATTGAAAAGTACGGTGGAACATTTTTTCCAAGTTGGTTTGGAGACAACTCATTGATAAGTCTGGTATCGCTAGAGTTGAGCAATTGTAAACATTGTATGATGCTTCCTTCGCTTGGAACTATGTCATCACTTAAGCACCTTCGGATCACTGGGCTCTCTGGGATAGTGGAGATTAGGACGGAGTTTTATAGGGATGTGAGCTGCTCTTCTCCATCTGTTCCATTTCCATCCTTGGAAACTTTAATTTTTAAGGATATGGATGGATGGAAAGATTGGGAATCTGAAGCTGTTGAGGTTGAGGTCTGA 2556 0.3834 MAAEFVGGAIVNSIIQVLVDKLASTEMMDYFRTKLDGNLLMKLNNSLISINAVVEYAEQQQIRRSTVRTWICNVKDAIMDAEDVLDEIYIQNLKSKLPFTSYHKNVQSKLQDIAANLELLVNMKNTLSLNDKTAADGSTLCSPIIPTNLPREPFIYGRDNEKELISDWLKFKNDKLSVISLVAMGGMGKTTLAQHLFNDPSIQENFDVLAWVHVSGEFNALQIMRDTLAEISGSYLNDTNFTLVQRKVANELNGKKFFIVLDNMWNDNEVELKDLKIPFQCGAEGSKILVTTRKSEVASGMESDHTHLLQKLEEEHAWDLFSKHAFKNLESSRITIGPGVFELIAEDVMRKCNGLPLALEAIGRLLSVHSSFKDWSEISKSGIWNLPGETRIVPALMLSYQKLPYDLKRCFGYCALFPKGYLFDKDDLILLWTAENFLPGQKKGENFLPGQKKGESYFNHLLSISFFQPSEKYKNYFIMHDLFHDLAETVFGDFCLTLGAERGKNISGITRHFSFVCDKIGSSKGFETLYTDNKLWTFIPLSMNSYQHRWLSPLTSLELPKLFLKCKLLRVLSLCGYMDMVELPDTVRNLIHLRHLDLSRTGIRNLPDSLCSLLYLQTLKVKDCEYLEELPVNLHKLVKLSYLDFSGTKVTRMPIQMDRLQNLQVLSSFYVDKGSESNVKQLGDLTLHGDLSIFELQNITNPSDAALADMKSKSHLLKLNLRWNATSTSSKNEREVLENLKPSIHLTTLSIEKYGGTFFPSWFGDNSLISLVSLELSNCKHCMMLPSLGTMSSLKHLRITGLSGIVEIRTEFYRDVSCSSPSVPFPSLETLIFKDMDGWKDWESEAVEVEV* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1541 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 414 IPR027417 -
Mtr2g1541 851 Pfam Rx N-terminal domain 11 103 IPR041118 -
Mtr2g1541 851 Gene3D Ribonuclease Inhibitor 517 840 IPR032675 -
Mtr2g1541 851 PANTHER OS05G0414200 PROTEIN 26 838 - -
Mtr2g1541 851 Gene3D - 399 489 IPR036388 -
Mtr2g1541 851 Gene3D - 14 123 - -
Mtr2g1541 851 PRINTS Disease resistance protein signature 178 193 - -
Mtr2g1541 851 PRINTS Disease resistance protein signature 251 265 - -
Mtr2g1541 851 PRINTS Disease resistance protein signature 352 366 - -
Mtr2g1541 851 PRINTS Disease resistance protein signature 766 782 - -
Mtr2g1541 851 PANTHER DISEASE RESISTANCE PROTEIN RP 26 838 IPR044974 GO:0006952
Mtr2g1541 851 Pfam NB-ARC domain 160 380 IPR002182 GO:0043531
Mtr2g1541 851 Gene3D - 311 398 IPR042197 -
Mtr2g1541 851 Gene3D - 139 308 IPR027417 -
Mtr2g1541 851 SUPERFAMILY L domain-like 479 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1541 Mtr-Chr2 17140188 17142789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1541 569 679 WRKY Transcription Factor Family AT4G12020 32.143 3.02e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1541 - - mtr:MTR_2g038760 904.049