Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1538 ATGACTATAAGCTTTGAGATTACATCAAAGAGTTATCTTATCCTTACTATATCTCTTCTGCAGAATAGGTTGAAAGTGGCTTTGTTTTCCATCAATGTTGTTGCTGATGATGCTGACCAAAAGCAGGTCAATAACTCTCATGTAAAAGACTGGCTTCTTGGGGTTAAAGATGGTGTTCTTGATGCTCAAGATCTGATTGAAGAAATTATCCACATTCAAGTCTCCAAGTCCAAGCAGGAAGCAGCTGAATCTCAAACAATCTCTACTGTAACCAACCAGCAATTGGGTACGTTCAATGTCTCTCCTACTTCAATTGACAAGAATGTAGTATCTAGGTTGAAAGTGGTAGTTCAAAAGCTTGAATCGCTTGTGGGCCTGAAAGATTCACTTCTTCTTCTGAATGTTAATACTGGTTTTAATGCTGGGTCACGGATGTTGAAGTCACCATGTTTTCCTTCTATGGAGTCTCATATGTTTGGGAGAAATAATGACCAAACAACACTCTCTAATTGGCTCAAATCGCAGGATAAGAAGCTCTCCGTTATTTCAATGGTAGGTATGGGTGGGATAGGGAAGACCACCCTTGCCCAACATTTGCACAATTATCCTATGATAGTGGAAAGCTTCGATGTTAGTGCATGGGTAAATGTGTCTCAGGATTTTGATGTTTGTAGAATTGCAAGGGTGATTCTAGAATCAATCAATGGTTCAGTCATTCAAAGTACAGATCAGAGTATTCTTGAGAAAAAGTTGAAGGAACAACTCATCGGGAAGAAATTCTTCATTGTTTTGGATAATGTTTGGATCCAAGACCGAATGAAATGGAGAAGGTTTAAGACTCCGTTTACTTATGGGGCACAAGGAAGTAAAATCCTTGTCACTACACGCAGTGGAGAAGTCGCGTCGGTCACGGCATCAGATCAAATTCATCAATTACATCATCTGGATGAAGAAGACTCCTGGACATTGTTTGCGAAACATGCCTTTCATGGCTTTGATGATTCTTATGCTGTCTCCTGGACGAAGAAGACTACCCTCCATGAGCAGATTGGTAAGATGGTGGCTGACAAATGCAAAGGATTACCTCTGGCCTTGATAGCCATCGGAGATCTCTTGAGCATAAACTGA 1128 0.4051 MTISFEITSKSYLILTISLLQNRLKVALFSINVVADDADQKQVNNSHVKDWLLGVKDGVLDAQDLIEEIIHIQVSKSKQEAAESQTISTVTNQQLGTFNVSPTSIDKNVVSRLKVVVQKLESLVGLKDSLLLLNVNTGFNAGSRMLKSPCFPSMESHMFGRNNDQTTLSNWLKSQDKKLSVISMVGMGGIGKTTLAQHLHNYPMIVESFDVSAWVNVSQDFDVCRIARVILESINGSVIQSTDQSILEKKLKEQLIGKKFFIVLDNVWIQDRMKWRRFKTPFTYGAQGSKILVTTRSGEVASVTASDQIHQLHHLDEEDSWTLFAKHAFHGFDDSYAVSWTKKTTLHEQIGKMVADKCKGLPLALIAIGDLLSIN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1538 375 Pfam Rx N-terminal domain 23 80 IPR041118 -
Mtr2g1538 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 373 IPR027417 -
Mtr2g1538 375 Gene3D - 142 310 IPR027417 -
Mtr2g1538 375 PRINTS Disease resistance protein signature 181 196 - -
Mtr2g1538 375 PRINTS Disease resistance protein signature 254 268 - -
Mtr2g1538 375 PRINTS Disease resistance protein signature 358 372 - -
Mtr2g1538 375 Gene3D - 314 375 IPR042197 -
Mtr2g1538 375 PANTHER OS05G0414200 PROTEIN 18 372 - -
Mtr2g1538 375 Gene3D - 13 99 - -
Mtr2g1538 375 PANTHER DISEASE RESISTANCE PROTEIN RP 18 372 IPR044974 GO:0006952
Mtr2g1538 375 Pfam NB-ARC domain 167 373 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1538 Mtr-Chr2 17120166 17121453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1538 172 369 WRKY Transcription Factor Family AT5G45050 24.631 3.58e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1538 - - mtr:MTR_2g039010 690.649