Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1533 ATGTGCAATATATCCATGATACCAACTTATCGTTATTCTGCATCTTCTCCTCCCATGCCTTTTTTTGATCTAAATAATGAAGATCACAATCACCATCTCTTCACTACTAATCAGCAAGCAACTTCTTCATCTTCTTCTCTATCATATTCTATACTCTTCAACCAAAATCAAGATCAAACAAATTCTTATTCTTGGGAATCAAACCACATACTAAGTGATGGTGTAGAGGTTAAGAATTTTGTACCTTCTAGTGAATCATGGGATCATCAAGAAGTGGAAAAGGATGCAAAAGATTGGAAGAAAGAAGAAGATAATGAAAATTTTAGGGATGAGGGGAGAATTTCAATGAAGTGGATGCCATCAAAGAAGAGAATGATTAAGAGGATGATGGAAGATCAAAGGGCTTCTGAGCAAGAATTTGAGAAACAAATCAAGCAATTATCACCAAATCTAGTAGGAACTGAGGATAGTAGCAACAACAATTTTTCAAACAACAGCACTGTTAGGGTTTGTACTGATTGCCACACAACTAAGACCCCTCTCTGGAGAAGTGGACCAACTGGTCCCAAGTCACTTTGCAATGCCTGTGGGATTCGACAAAGAAAAGCGAGACGCGCCCTTGCAGCAGCTGCAAATGGTGAGACTCTTGTGGTGGCAGAGAAACCATATGTGAAGGGAAAGAAGTTGCAAATCAAAAGGAAAAGGTCAAAAACTGATCAATGTGCACAACTATTGAAAAGGAAGGGTAAAAGTGAAAACAAGTGTAATAATTTTGAAGATTTGATAACAAGTTGGAGCAACAACTTGGCTTCCCATCAAGTTTTCCCTCAAGATGTGAAGGAGGCTGCTATTCTACTCATGGCTTTATCTTCTGGCTTACTTAATGGATGTTCTTCTGATGAATGCTAA 909 0.3828 MCNISMIPTYRYSASSPPMPFFDLNNEDHNHHLFTTNQQATSSSSSLSYSILFNQNQDQTNSYSWESNHILSDGVEVKNFVPSSESWDHQEVEKDAKDWKKEEDNENFRDEGRISMKWMPSKKRMIKRMMEDQRASEQEFEKQIKQLSPNLVGTEDSSNNNFSNNSTVRVCTDCHTTKTPLWRSGPTGPKSLCNACGIRQRKARRALAAAANGETLVVAEKPYVKGKKLQIKRKRSKTDQCAQLLKRKGKSENKCNNFEDLITSWSNNLASHQVFPQDVKEAAILLMALSSGLLNGCSSDEC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1533 302 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 165 205 - -
Mtr2g1533 302 ProSiteProfiles GATA-type zinc finger domain profile. 165 201 IPR000679 GO:0006355|GO:0043565
Mtr2g1533 302 ProSitePatterns GATA-type zinc finger domain. 171 196 IPR000679 GO:0006355|GO:0043565
Mtr2g1533 302 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 6 296 - -
Mtr2g1533 302 Pfam GATA zinc finger 171 204 IPR000679 GO:0006355|GO:0043565
Mtr2g1533 302 SMART GATA_3 165 216 IPR000679 GO:0006355|GO:0043565
Mtr2g1533 302 Gene3D - 162 248 IPR013088 GO:0006355|GO:0008270
Mtr2g1533 302 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 6 296 - -
Mtr2g1533 302 CDD ZnF_GATA 170 198 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1533 Mtr-Chr2 17047789 17050466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1533 49 296 C2C2-Gata Transcription Factor Family AT4G26150 34.014 1.71e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr2g1533 GATA 9e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1533 - - gmx:100780875 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4669 4 60708245 60710151 Mtr2g1533 2 17047789 17050466 PCT