Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1529 ATGCCTCTCCGAGTACTTCAAGGAGAAGCTTCTTTACCCTCAAATGATGAGTCAAAGAAGTCAAGTGAACACAAACGTGAAACAATGTTCTTTGTCCTAGGAGGGATAGTAGTGGTAACCATAATATTGATTCTTGGTTGGATTGTATTTAGAAAACGTGTGAAACGATCACCAAATCCAGTGGGAAAGACAGTTCCAAATGAAGCTGAACCTACAGAGGTGATGAAGGCGATATTTCCATCCAAACAACAATCATCAGGGTCAATGGAGTTCTTTAGTGGGAGCCTTCGGTCTATTAGCTACTTTGATTACCAGACGTTGAGGAAGGCAACCAATAACTTCTTTCATGGAAATCTTCTTGGAAGTGGTGGATTTGGACCTGTATATAAGGGAAAGTTGGAAGATGGAAGGATCATTGCTGTTAAGGCATTATCTCTTAACAAATCTCAACAAGGAGAAAGAGAATTTTTGGCTGAGGTTAAATTGATCACAAGTATCCAACACAAAAATTTGGTTCGCCTTCTTGGAAGTTGTATAGATGGTCCTCAAAGAATACTTATTTATGAATACATGAAAAACCGAAGTTTGGATCTCTTCATATATGGAAACAATGATCGATTTTTGAATTGGAGCACTAGGTATCAAATCATACTTGGAGTAGCACGTGGACTTCAATACCTTCATGAAGATTCACACCTAAGAATTGTTCATAGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTTTGCCTAGAATTGGTGACTTTGGGCTAGCAAGATTTTTTCCAGAAGACCAAGCTTATCTTAGCACACAGTTTGCAGGAACATTAGGATATACAGCTCCTGAATATGCTATTAGAGGGGAATTATCAGAAAAGGCTGATATCTATAGTTTTGGAGTTCTCCTTCTTGAAATTATATGTTGCAGGAAAAATACAGATCATACTTTACCACCAGATATGCAATACCTCCCTGAATATGCATGGAAATTATATGAGAAATCAAGTTTATTAGATCTTGTTGATCCAAAGCTGAAACAAGATGGATTTGTGGAAAAGGATGTTATGCAAGCAACCCATGTGGCTCTCTTATGCCTGCAACCTCATGCACATTTGAGACCACGGATGTCGGAAATTGTGGCATTGTTAACATTCAAAATTGAAATGGTTACAACACCAATGAGACCAGCCTTCCTTGGCCTTCGGTCAAGGAAGGATGAAGATAATCATTCTTTTGAAGTTACATCTATGGCAAACCACTAA 1269 0.3814 MPLRVLQGEASLPSNDESKKSSEHKRETMFFVLGGIVVVTIILILGWIVFRKRVKRSPNPVGKTVPNEAEPTEVMKAIFPSKQQSSGSMEFFSGSLRSISYFDYQTLRKATNNFFHGNLLGSGGFGPVYKGKLEDGRIIAVKALSLNKSQQGEREFLAEVKLITSIQHKNLVRLLGSCIDGPQRILIYEYMKNRSLDLFIYGNNDRFLNWSTRYQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFLPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHTLPPDMQYLPEYAWKLYEKSSLLDLVDPKLKQDGFVEKDVMQATHVALLCLQPHAHLRPRMSEIVALLTFKIEMVTTPMRPAFLGLRSRKDEDNHSFEVTSMANH* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1529 422 PANTHER RECEPTOR-LIKE KINASE 93 398 - -
Mtr2g1529 422 Pfam Protein tyrosine and serine/threonine kinase 118 384 IPR001245 GO:0004672|GO:0006468
Mtr2g1529 422 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 398 - -
Mtr2g1529 422 CDD STKc_IRAK 120 386 - -
Mtr2g1529 422 SUPERFAMILY Protein kinase-like (PK-like) 89 388 IPR011009 -
Mtr2g1529 422 Gene3D Phosphorylase Kinase; domain 1 75 190 - -
Mtr2g1529 422 MobiDBLite consensus disorder prediction 1 21 - -
Mtr2g1529 422 Gene3D Transferase(Phosphotransferase) domain 1 191 394 - -
Mtr2g1529 422 SMART serkin_6 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1529 422 ProSiteProfiles Protein kinase domain profile. 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1529 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1529 Mtr-Chr2 16980476 16986922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1529 102 414 Receptor kinase-like Gene Family AT1G56120 47.604 1.16e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g1529 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1529 - - gmx:100791042 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4674 4 60743373 60746402 Mtr2g1529 2 16980476 16986922 PCT