Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1517 ATGAGTTTCATGAACGGTTCATCACCTCACCGGAATCCTCCACCGCCGCCGGAGAATGATATTGAAGCTGGTCCGTTGTCTCGCCGGAATTCTGATGTTGATGACGACGGTGATGTCTTTGATATTGCTAGAACTAAGCATGCTTCCATTGATCGACTTCGCCGCTGGAGACAAGCGGCGCTTGTGCTAAATGCTTCCCGTCGATTTCGTTATACCTTGGACTTGAAGAAGGAAGAAGAGAAAAAACAAATACTGAGAAAGATTAGAGCGCATGCTCAAGCCATCAGAGCAGCATATCTTTTCAAGGCAGCTGGACGGGGACAAGGGCACGGACAAGTGCAAGGGCAAGTTACTGGGACTGACACTATTAAACCTCCTCCAACCTCTACTGGTGAATTTCCAATTGGGCCAGAACAACTTGCTTCGATTTCAAGGGAGCATGATACTGCTTCTCTGCAGCAATATGGAGGGGTTGCAGGGGTATCAAATTTATTGAAAACCGATTTAGAGAAGGGAATTAATGGTGATGATGCCGACTTACTAAGACGGAGGAATGCGTTTGGTTCCAACAATTACCCTCGAAAGAAAGGAAGAAGTTTTTTTATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGGTTATTTTAATGGTAGCGGCAGCAGCTTCATTGGCACTGGGGATCAAATCTGAGGGTATTAAGGAAGGGTGGTATGATGGGGGAAGTATTGCTTTTGCGGTTATTCTTGTCATCGTCGTTACTGCTGTAAGCGACTACAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAAAAGAGAAATATACACCTGGAGGTTATTAGAGGTGGTAGAAGGGTTGAGATCTCCATATATGATCTTGTTGTTGGGGATGTTATACCTCTTAATATTGGTAACCAGGTCCCTGCTGATGGAGTTGTGATTACTGGGCACTCTCTTTCGATTGACGAGTCCAGCATGACAGGGGAGAGCAAAATTGTCCATAAGGATTCTAAGGATCCCTTTATGATGTCTGGCTGTAAGGTGGCAGATGGCAGTGGGACTATGCTGGTCACGGGCGTGGGAATTAATACTGAATGGGGCCTTCTAATGGCTAGCATTTCAGAAGATACTGGTGAAGAAACACCTTTGCAGGTCCGCTTGAATGGCGTAGCCACCTTTATTGGTATCGTTGGACTCAGTGTTGCTGTCCTTGTCCTGATTGTGCTACTGGCCAGATATTTCTCTGGGCATACAAGGAATTCTGACGGGACAAAACAATTTATAGCAGGCAAGACTAAAGCTGGGCATGCTATTGATGGAGCAATTAAGATAATAACTGTTGCGGTCACCATTGTAGTTGTTGCAGTGCCTGAGGGGCTCCCACTTGCAGTCACTCTAACACTGGCCTACTCAATGCGAAAGATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTACAACCATATGTAGTGACAAGACTGGCACATTAACGATGAACCAGATGACTGTGGTTGAGGTTTATGCCGGGGGCAGCAAGGTTGATCCTCCTCACGAGTTGGAGAGATCTCCTAAGCTACGCACTCTACTCATTGAAGGTGTTGCACAGAACACTAATGGCAGCGTTTATGTGCCTGAGGGTGCCAATGACATCGAGGTTTCAGGATCACCAACAGAAAAGGCTATTTTAAATTGGGGCCTACAGGTTGGGATGAATTTTGTGACTGCTCGGTCAGAATCGTCAATTCTTCATGTCTTTCCATTCAACTCTGAGAAAAAGAGAGGCGGAGTTGCAATACAGACGGCTGACTCTGATGTTCATATACATTGGAAAGGTGCTGCTGAAATTGTTCTAGCCTGCTGTACAGGTTATATTGATGCAAATGATCAGTTGGTGGAGATTGATGAGGAGAAGATGACTTTTTTCAAGAAAGCTATCGAAGATATGGCTTCTGATAGTCTACGTTGTGTTGCCATTGCGTATAGACCATACGAGAAGGAGAAAGTCCCAGATAATGAGGAACAACTTGCTGACTGGTCTTTGCCAGAAGAGGAACTTGTTTTACTAGCTATTGTTGGTATCAAGGATCCTTGTCGACCTGGTGTCAAAAATTCAGTACAGCTTTGCCAAAAAGCCGGGGTTAAGGTCAAGATGGTCACTGGCGACAATGTCAAAACTGCAAAAGCTATTGCTCTGGAATGTGGAATACTGAGTTCACTTGCTGATGTTACCGAGAGAAGTGTCATTGAAGGAAAAACATTCCGAGCCTTGTCAGATTCCGAGAGAGAAGAGATTGCGGAATCGATATCGGTTATGGGAAGGTCATCTCCCAATGATAAACTGTTGTTGGTGCAAGCCTTAAGGAGGAAGGGCCATGTTGTAGCTGTAACAGGGGATGGCACAAATGACGCCCCTGCACTTCATGAGGCGGATATTGGTCTTGCAATGGGTATTGCTGGTACAGAAGTGGCGAAAGAGAGTTCGGATATCATTATCTTGGATGACAACTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGTCGGTCTGTTTATGCGAATATTCAGAAATTTATCCAGTTTCAGTTGACAGTCAATGTGGCGGCTCTTGTTATAAATGTGGTTGCTGCAGTTTCCTCTGGTGATGTTCCACTGAACGCAGTGCAGCTTCTTTGGGTGAATCTTATCATGGATACTCTAGGAGCACTAGCTTTGGCAACTGAACCGCCAACTGACCACCTGATGGACCGGTCTCCCGTGGGTCGAAGGGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTATCAAGTTTCTGTCTTGCTTGTTCTCAATTTCAGAGGTATAAGCATATTGGGTCTGGAGCATCAACCTACTGAACATGCAATCAAAGTAAAAAACACTTTGATCTTCAATGCATTTGTTATCTGTCAAATCTTCAATGAATTTAATGCGCGCAAGCCAGATGAATACAACATTTTCAAAGGAGTTACTAGAAACTACCTCTTCATGGGGATAGTGGGATTCACTGTCGTACTTCAGGTTATCATAGTTGAATTTCTTGGGAAGTTCACTACAACCACCAGGCTTAATTGGAAGCAGTGGCTTATTTCTGTCGCTATTGGATTCATTGGTTGGCCTCTTGCTGTGGTTGGGAAGTTGATACCAGTACCAGCTACTCCCATCAACAATGTTTTCACTAAGCTTAAGCTTCGACGACATAGGCAACCTGAGCCTTCTCAATAG 3282 0.4482 MSFMNGSSPHRNPPPPPENDIEAGPLSRRNSDVDDDGDVFDIARTKHASIDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGRGQGHGQVQGQVTGTDTIKPPPTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDADLLRRRNAFGSNNYPRKKGRSFFMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFRDLNEEKRNIHLEVIRGGRRVEISIYDLVVGDVIPLNIGNQVPADGVVITGHSLSIDESSMTGESKIVHKDSKDPFMMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLIVLLARYFSGHTRNSDGTKQFIAGKTKAGHAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEVYAGGSKVDPPHELERSPKLRTLLIEGVAQNTNGSVYVPEGANDIEVSGSPTEKAILNWGLQVGMNFVTARSESSILHVFPFNSEKKRGGVAIQTADSDVHIHWKGAAEIVLACCTGYIDANDQLVEIDEEKMTFFKKAIEDMASDSLRCVAIAYRPYEKEKVPDNEEQLADWSLPEEELVLLAIVGIKDPCRPGVKNSVQLCQKAGVKVKMVTGDNVKTAKAIALECGILSSLADVTERSVIEGKTFRALSDSEREEIAESISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGISILGLEHQPTEHAIKVKNTLIFNAFVICQIFNEFNARKPDEYNIFKGVTRNYLFMGIVGFTVVLQVIIVEFLGKFTTTTRLNWKQWLISVAIGFIGWPLAVVGKLIPVPATPINNVFTKLKLRRHRQPEPSQ* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1517 1093 Pfam haloacid dehalogenase-like hydrolase 495 819 - -
Mtr2g1517 1093 Gene3D - 206 1056 - -
Mtr2g1517 1093 Pfam Ca2+-ATPase N terminal autoinhibitory domain 39 80 IPR024750 GO:0005516
Mtr2g1517 1093 SUPERFAMILY HAD-like 496 910 IPR036412 -
Mtr2g1517 1093 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g1517 1093 CDD P-type_ATPase_Ca_PMCA-like 180 938 - -
Mtr2g1517 1093 MobiDBLite consensus disorder prediction 111 127 - -
Mtr2g1517 1093 Pfam Cation transporter/ATPase, N-terminus 156 223 IPR004014 -
Mtr2g1517 1093 Gene3D - 508 705 IPR023299 GO:0000166
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 322 336 - -
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 498 512 - -
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 698 709 - -
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 720 730 - -
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 805 824 - -
Mtr2g1517 1093 PRINTS P-type cation-transporting ATPase superfamily signature 829 841 - -
Mtr2g1517 1093 Gene3D - 48 103 - -
Mtr2g1517 1093 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 147 1069 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mtr2g1517 1093 Pfam Cation transporting ATPase, C-terminus 890 1066 IPR006068 -
Mtr2g1517 1093 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 771 885 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1517 1093 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 438 522 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1517 1093 SFLD p-type atpase 480 857 IPR044492 -
Mtr2g1517 1093 PANTHER CATION TRANSPORTING ATPASE 37 1083 - -
Mtr2g1517 1093 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 702 IPR023299 GO:0000166
Mtr2g1517 1093 SMART Cation_ATPase_N_a_2 154 228 IPR004014 -
Mtr2g1517 1093 Gene3D - 179 374 - -
Mtr2g1517 1093 Gene3D - 495 850 IPR023214 -
Mtr2g1517 1093 SUPERFAMILY Calcium ATPase, transmembrane domain M 155 1069 IPR023298 -
Mtr2g1517 1093 SUPERFAMILY Calcium ATPase, transduction domain A 276 371 IPR008250 -
Mtr2g1517 1093 SFLD C1.7: P-type atpase like 480 857 - -
Mtr2g1517 1093 PANTHER CALCIUM-TRANSPORTING ATPASE 37 1083 - -
Mtr2g1517 1093 MobiDBLite consensus disorder prediction 109 129 - -
Mtr2g1517 1093 Pfam E1-E2 ATPase 276 476 - -
Mtr2g1517 1093 PRINTS Sodium/potassium-transporting ATPase signature 241 261 - -
Mtr2g1517 1093 PRINTS Sodium/potassium-transporting ATPase signature 491 512 - -
Mtr2g1517 1093 PRINTS Sodium/potassium-transporting ATPase signature 616 634 - -
Mtr2g1517 1093 ProSitePatterns E1-E2 ATPases phosphorylation site. 500 506 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1517 Mtr-Chr2 16808538 16827524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1517 1 1083 Primary Pumps ATPases AT5G57110 73.456 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1517 K01537 - gmx:100792945 1813.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1517 2 16808538 16827524 Mtr2g1517 2 16808538 16827524 ECH