Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1508 ATGGAGAACATTGGTGATGAGTACAAGCATTACTGGGAGACCAACATGTTCTTCCAAACTCAAGAGCTTGATAGCTGGGGATTGGATGAGGCTTTATCAGCATATTATGATTCAAGCTCACCAGATGGTGCAGCATCATCAGGAGTTTCATCTAAGAACATTGTCTCTGAGAGGAATAGGAGAAAGAAGCTTAATGAAAGACTCTTTGCACTTAGAGCAGTGGTCCCAAACATTAGCAAGATGGATAAAGCTTCAATAATTAAGGATGCTATTGAGTACATACAGCTGTTGCATGAGCAAGAAAAGGTTATTCAAGCTGAGATAATGGAACTTGAATCAGGGATGCCTAATAATATTAATCCAAGCTATGATTTTGATCAAGAGCTTCCTATGTTGCTAAGGTCCAAGAAGAAGAGAACAGATCAGTTATATGATTCTGTCAGTTCAAGAAACTTTCCAATTGAAGTCCTTGAGCTTAGGGTTACATACATGGGAGAGAATACAATGGTAGTGAGCTTGACATGTAACAAAAGGGCAGACACAATGGTAAAATTGTGTGAAGTTTTCGAATCTTTGAAGCTTAAAATTATTACTGCCAACATCACCTCTTTTTCAGGCAGGCTTTTGAAGACAGTCTTCATTGAGGCAAATGAGGAAGATAAAGATCAATTGCAAACGAATATCCAAACAGCCATTGCAGCTCTTAATGACCCTCTAAGCCCTATGAGCATCTAA 735 0.3878 MENIGDEYKHYWETNMFFQTQELDSWGLDEALSAYYDSSSPDGAASSGVSSKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQLLHEQEKVIQAEIMELESGMPNNINPSYDFDQELPMLLRSKKKRTDQLYDSVSSRNFPIEVLELRVTYMGENTMVVSLTCNKRADTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEANEEDKDQLQTNIQTAIAALNDPLSPMSI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1508 244 Gene3D - 49 113 IPR036638 GO:0046983
Mtr2g1508 244 Pfam Helix-loop-helix DNA-binding domain 55 97 IPR011598 GO:0046983
Mtr2g1508 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Mtr2g1508 244 Coils Coil 214 234 - -
Mtr2g1508 244 PANTHER TRANSCRIPTION FACTOR BHLH35 1 238 - -
Mtr2g1508 244 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 238 - -
Mtr2g1508 244 SUPERFAMILY ACT-like 166 234 IPR045865 -
Mtr2g1508 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 114 IPR036638 GO:0046983
Mtr2g1508 244 SMART finulus 54 103 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1508 Mtr-Chr2 16664253 16671874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1508 1 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 65.138 5.55e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g1508 HLH 6.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1508 - - gmx:100817978 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1508 2 16664253 16671874 Mtr2g1508 2 16664253 16671874 ECH