Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1504 ATGCGGGATACTGAGAGGTTAAATAACCAAGGATCTACAAAACCGAGTAACACAAAGGAACATATCAAGTTGAAGGTAGATTCCCCACAGTTCAAAACAAGTAGCACAAAACACCAAAGGAAGAAACACAGACTGAAATCAAAATCTCATAAACTCGGAGGTTGCACAAATGCGTCAGTGAGGACAGCTACTGATTCTTCCAACAAGGCGTCAACCAAGGATTCTTCAAATAAAACGGATAGGAATTCAACACAGGTTCAGCCTTCAAAAAAGATACAAGGAGGAAAAACTTCTCTTAATAATGATAGGAAAGGTGAGAAAGATGTTGTTGATCAAGAGGGAAATATTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAGACAAAGACATAATGTAGATCTTGATGATACTGTACGCCTCCAGAGAAGAACAAGGAATATCTTAATCAGAATGAAGCAAGAACAGAATCTTATCGATGCTTACGCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAGAAGATTAGGCCAGAAATGGAGCTACAAAGAGCAAAAAAGCAGATTTTAAAATGCAAGCTTAGTATCCGTGATGCCATTCACCAACTGGATTCTCTTAGTTCAGTTGGTAGTATTGAAGGTTCTGTCATTGCTACAGATGGATCTGTTTCTCATGAACATATATTCTGTGCAAATTGCAAGATAAACGAAGTTTCTCCAGATAATGATATTATACTCTGTGATGGCACATGCAATCGTGCGTTTCACCAGAGATGTCTTGATCCTCCTTTGGAGACTGAAGACATTCCTCCTGAAGACCAAGGCTGGTTTTGCAAGTATTGTGACTGTAAGATAGAAATATTGGAGGCAACAAACGCGCATCTTGGGACTCGTTTCCCCTTAGACAGTACTTGGCAGGATGTATTCAAGGAAGAAGCTGCTATTCCTGACGGCGATGCTGCATTACTAAATCAAGAAGAAGAATGGCCGTCAGATGATCCTGAAGACGATGACTATAATCCAGAGAGGAAAGAAGAAAGCCACGGTGGCTTCAACACAGAAGGAAATGATAAAAACGCATCTGATGATTCAAGCAGTTCTTCCAGCATGTGGTCTCTAAATGGAGAATGCTCTCTGTTAGATGAAGGCATCAACCTTGAATATTATTCTAACGACCACATAGATTCTGATGAATCCGGGGAAATAGCATGCGGTCGTAGGCAGCGTAGAGCTGTTGACTACAAGAAACTTTATGATGAAATGTTTGGAAAGGATGCTCCACCTTGTGAACAAGTGAGTGAAGATGAAGATTGGGGTCCTCGAAAAAGACGGCGAAGAGAAAAGGAGTCTGAGGCTGTTAATACTCTTATGACTCTACATGAGAGTGAAAATAAATATCCGAATAATAAGAACAATGATAGAATAAGAGGGAATTCTTCAGGCATAAAAAGACCTTGTTTTAGGTTTTCACATGAGGCAGTTGAGAAGCTTCGCCAAGTTTTTGCAGAGAACGAGCTTCCTCCAAAATCCGTGAAGGATGCCCTTTCAAAAGAATTGGGACTTGATGCTGCAAAGGTTAACAAATGGTTCAAAAATGCACGTTACATGGCACTTAAAATAAGAAAGCTTCAAGAAGGAGGACAACAGCTTCAGAGTATCACTTCTAAGACCTCAAAGGATTCTACATCACAACATGTGCAGGAAGATGAGGTTTTGAACCCGAAGTCCGCGAAAATTACTGTGATTAGTTCCCTGAAGAAGTGTGAAAATGTTACTGGCAAAGAAAAAACAAAAGCATCTAGCAATCCTTTGAAGAAAAAGCGACCAGAAATACCTCCATGCTTGGGAGAAAATGGCAACAAGGATTCCATGGAGGTCAGTGATGATGTTAGCTTAATGAAACTATTACAAGACAGGAAAAAGAAGGTAAGTTTTGCATTTGAAGGAGACTCTGAGGCAGCAGAGTTGGAATTTGAAAGACTCAGCAAAGTGAAGACGAAAATAGATAGATTGAAGCAAAGATTAACTGGAGTTCAAAATTGCAGATCAAAGGGTTCAGATGAAGTTCATTTGAATGAGCCATCTATTATGTATGTTCCTATAGCTGAGTTAAGGGAAAAGGTGAAATAG 2124 0.3983 MRDTERLNNQGSTKPSNTKEHIKLKVDSPQFKTSSTKHQRKKHRLKSKSHKLGGCTNASVRTATDSSNKASTKDSSNKTDRNSTQVQPSKKIQGGKTSLNNDRKGEKDVVDQEGNIQKRKRRRKKKRQRHNVDLDDTVRLQRRTRNILIRMKQEQNLIDAYAGEGWKGQSREKIRPEMELQRAKKQILKCKLSIRDAIHQLDSLSSVGSIEGSVIATDGSVSHEHIFCANCKINEVSPDNDIILCDGTCNRAFHQRCLDPPLETEDIPPEDQGWFCKYCDCKIEILEATNAHLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPEDDDYNPERKEESHGGFNTEGNDKNASDDSSSSSSMWSLNGECSLLDEGINLEYYSNDHIDSDESGEIACGRRQRRAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPRKRRRREKESEAVNTLMTLHESENKYPNNKNNDRIRGNSSGIKRPCFRFSHEAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARYMALKIRKLQEGGQQLQSITSKTSKDSTSQHVQEDEVLNPKSAKITVISSLKKCENVTGKEKTKASSNPLKKKRPEIPPCLGENGNKDSMEVSDDVSLMKLLQDRKKKVSFAFEGDSEAAELEFERLSKVKTKIDRLKQRLTGVQNCRSKGSDEVHLNEPSIMYVPIAELREKVK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1504 707 SUPERFAMILY FYVE/PHD zinc finger 219 284 IPR011011 -
Mtr2g1504 707 Pfam Homeodomain 486 532 IPR001356 GO:0003677
Mtr2g1504 707 Pfam PHD-finger 227 282 IPR019787 -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 1 134 - -
Mtr2g1504 707 ProSiteProfiles Zinc finger PHD-type profile. 225 282 IPR019787 -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 323 369 - -
Mtr2g1504 707 CDD homeodomain 481 542 IPR001356 GO:0003677
Mtr2g1504 707 MobiDBLite consensus disorder prediction 424 449 - -
Mtr2g1504 707 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 11 683 - -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 52 99 - -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 100 117 - -
Mtr2g1504 707 PANTHER POLYCOMB PROTEIN PCL 11 683 - -
Mtr2g1504 707 SMART PHD_3 227 280 IPR001965 -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 324 338 - -
Mtr2g1504 707 SUPERFAMILY Homeodomain-like 475 540 IPR009057 -
Mtr2g1504 707 CDD PHD_PRHA_like 227 279 IPR045876 -
Mtr2g1504 707 ProSiteProfiles 'Homeobox' domain profile. 478 538 IPR001356 GO:0003677
Mtr2g1504 707 MobiDBLite consensus disorder prediction 590 621 - -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 35 50 - -
Mtr2g1504 707 SMART HOX_1 480 542 IPR001356 GO:0003677
Mtr2g1504 707 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 276 IPR013083 -
Mtr2g1504 707 Gene3D - 477 543 - -
Mtr2g1504 707 MobiDBLite consensus disorder prediction 351 369 - -
Mtr2g1504 707 ProSitePatterns Zinc finger PHD-type signature. 228 279 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1504 Mtr-Chr2 16630098 16636149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1504 132 542 Homeobox Transcription Factor Family AT4G29940 58.118 9.56e-154 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mtr2g1504 PHD 2.8e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1504 - - gmx:100787118 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1504 2 16630098 16636149 Mtr2g1504 2 16630098 16636149 ECH