Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1490 ATGGCTATGCAAATAAATATAGGTGCTTCTTCTTCTTCTACTTTGGAGGTGGCTTCAAATTCTTTTGATGTTTTTATTAGCTTTCGTGGTGATGATACTCGTAGAAAATTCACAAGCCATCTTAATGAAGCTTTGAAAAAGAGCGGCCTTAAGACATTTATAGATGACAACGAGCTTAAAAAAGGAGATGAGATCTCATCAGCACTGATCAAAGCCATTGAAGAGTCATGTGCATCTATAGTCATCTTATCAGAAAACTATGCTTCTTCAAAATGGTGTTTGAATGAACTCGTCAAGATTCTAGAATGCAAGAAAGATAATGGACAAATTGTGATACCAATTTTCTATGAAATAGATCCATCTCATGTGAGATATCAGATTGGGAGCTACGGGCAAGCCTTTGCAAAGTATGAGAAGAATTTGAGGCACAAGAAAGACAACTTGCAAAAATGGAAAGATGCTCTCACCGAAGTCTCCAAATTATCTGGGTGGGACTCTAAAAATTCAAGGATTGAATCGGACTTCATTAAGGACATCGTCAAAGATGTTTTGGAAAAACTGAATCACGGACGCCCATTTGAAGCCAATAAGGAACTTGTTGGAATTGAAGAAAAGTATGAAGAGATTGAATTGTTAACGAATAATGGGTCAAATGATGTTAGAACGCTTGGATTATGGGGCATGGGGGGCATAGGAAAGACCGCTCTAGCAAAAAGTTTATATGGTAACTATTGTTCTCAATTTGAATATCATTGTTTCCTCGAAAATGTAAGGGAAGAATCAACTAGGTGTGGACTCAATGTTGTACGTAAGAAGCTGTTTTCTACATTGCTGAAGCTTGGTCTTGATGCGCCTTATTTTGAAACCCCAACTTTCAAAAAAAGACTTGAACGTGCAAAATGTTTGATTGTGTTGGACGATGTTGCAACCTTAGAGCAAGCAGAAAATCTAAAGATCGGTCTGGGACTAGGTAGTAGAGTCATTGTCACAACAAGAGATAGGAAAATATGTCATCAATTTGAAGGATTTGTGGTATATGAGGTCAAGGAATTGAATGAAGATGAATCTCTTCAACTATTCTGTTGTAATGCATTTCAAGAAAAACATGCTAAAGAAGGATACGAAGAGCTCTCAAAAAGTGCAATTGGATATTGCAGAGGCAATCCTCTAGCTTTGAAAGTTTTAGGTGCGAATTTTCGTGCAAAAAGCAAAGAAGCATGTGAAAGTGAATTGGAAAAGATAAAAGAGATTCCTTATGCAGGAATTCATGATGTGTTAAAACTGAGTTTCTATGACTTAGATCGTACTCAACGTGACATATTTCTAGACATTGCCTGCTTCTTCTACCCAAAAATAAATCACTTTTATTGTTATGGACGGCGAGAATACATAATAGATCTATTTAATGCTTGCAAATTTTATCCGGCAACTTCAATAGAAGTCCTTCTTCATAAATCACTCATGACTTTTGGATATCGTGATCAAATCGAAATGCATGATTTGGTCGTAGAAATGGGACGAGAGATTGTTAAGCAAGAAGCTCCGAAAGACCCCGGAAAAAGAAGTCGATTGTGGGATCCCGAGTTAATTTATGAAGTATTTAAATACAACAAGGGAACTGATGCTGTTGAAGTTATACTATTTGATACTTCTAAAATTGGTGATGTATACTTGAGCTCCAGATCCTTTGAGAGCATGATCAACTTAAGATTACTTCATATCGCCAATGAATGCAACAATGTGCATCTCCAAGAAGGTCTTGAGTGGTTGTCTGATAAATTGAGGTACCTTCATTGGGAATCATTTCCACTTGAATCTTTGCCATCAACCTTTTGTGCTCAAAACCTTGTACAACTTAGCATGACCCATAGCAAGCTTAGAAAGCTTTGGGATAGAATTCAGAAGCTTGACAATTTAACAATCATTAAACTTGATAACTCTGAAGACCTGATTGAGATTCCGGACTTATCAAGAGCACCGAATCTTAAAATATTATCTCTTGCTTATTGTGTGAGTCTCCATCAACTCCATCCTTCCATTTTCAGTGCCCCCAAGCTTAGAGAACTATGCTTAAAAGGTTGTAAAAAGATTGAAAGCCTTGTAACTGACATTCATTCAAAATCTCTCCAAAGACTGGATCTCACTGATTGTTCATCCCTCGTACAATTTTGTGTGACATCAGAAGAAATGAAATGGTTGTCGTTACGTGGCACAACTATCCATGAATTTTCATCATTGATGTTGCGTAATAGCAAACTAGACTATCTTGATCTAGGTGATTGTAAGAAGCTTAACTTTGTTGGGAAGAAGCTATCAAATGATCGAGGATTAGAGTCTCTTTCAATATTGAACCTTTCAGGATGCACACAAATCAATACATTGAGTATGTCGTTCATCCTTGATAGCGCACGATTTTTAAAATATCTAAATCTGAGAAATTGTTGCAACTTAGAAACCCTCCCTGACAACATCCAAAACTGTTTAATGTTGAGATCCCTTCATTTAGATGGTTGCATAAACCTTAATTCACTACCAAAGCTTCCTGCATCCTTGGAAGAGTTGAGCGCCATTAACTGCACATATCTGGACACAAACTCCATTCAAAGAGAAATGCTTGAGAACATGTTATACAGATTACGCACCGGAAACCACTTTGGTTCACCTTTTATTTCTCCAGAAGGCTTTTTCAATTTACTTCTTCCGGTTGCCGAAGTTCCATGCGGGTTTGATTTCTTCACAACGGAGGCTTCAATCATTATTCCTCCTATTTCAAAATATGAATTCTATCATATTGTTTTATGCGTCTTTCTCTCTGAGGGGTTAAATCTTACTTCTTCCGGAGTTAATTGTACTATATATAATCACGGAGACAGAAGCGGCGGATGGAATATAAGTTTTGAGCATGTGAGCGGGGCAATGATTTCAGACCATGTAATGCTATTCAGTTCGTCTGGCGGTATTTACCATCAGACGAGGGCGGATAATGATCATTACAGGCTTTCATTTGAAGTCGAACTTTATGGTAAAGACTGGGAACAATTGTCGTCAACTAAGGGGATAAAGGGTTGTGGGGTCATCCTTGTATCTAGCTTGGAACATTATTGTTTGCGGTTGGATGGTAGTAGTAGCCGAAGTAAAGTTGAAATTGTTGAATTACCCTTCAATGCTCAAGTTTCTGATGAGTTTGATCAACATTCAAATATTGATGATGATGAAAATGAAGATGCCCAACAACAACTTCTTATTACCCCCAAAGAAAATGAGGAAGACTTGAATTATAAATCTTCTTGTGATTGTTCAATAGGTCTTTTGCTGCAGCAGCTCCTAGAAGTGTCAAAACGTCTATTTCTCTTGTGTGTCAAGCTAAACGATAAGACAAAATCGTAG 3387 0.3738 MAMQINIGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEISSALIKAIEESCASIVILSENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQIGSYGQAFAKYEKNLRHKKDNLQKWKDALTEVSKLSGWDSKNSRIESDFIKDIVKDVLEKLNHGRPFEANKELVGIEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREESTRCGLNVVRKKLFSTLLKLGLDAPYFETPTFKKRLERAKCLIVLDDVATLEQAENLKIGLGLGSRVIVTTRDRKICHQFEGFVVYEVKELNEDESLQLFCCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDIFLDIACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQIEMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLSSRSFESMINLRLLHIANECNNVHLQEGLEWLSDKLRYLHWESFPLESLPSTFCAQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLEELSAINCTYLDTNSIQREMLENMLYRLRTGNHFGSPFISPEGFFNLLLPVAEVPCGFDFFTTEASIIIPPISKYEFYHIVLCVFLSEGLNLTSSGVNCTIYNHGDRSGGWNISFEHVSGAMISDHVMLFSSSGGIYHQTRADNDHYRLSFEVELYGKDWEQLSSTKGIKGCGVILVSSLEHYCLRLDGSSSRSKVEIVELPFNAQVSDEFDQHSNIDDDENEDAQQQLLITPKENEEDLNYKSSCDCSIGLLLQQLLEVSKRLFLLCVKLNDKTKS* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1490 1128 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1080 - -
Mtr2g1490 1128 SUPERFAMILY L domain-like 498 898 - -
Mtr2g1490 1128 Gene3D - 188 344 IPR027417 -
Mtr2g1490 1128 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1080 IPR044974 GO:0006952
Mtr2g1490 1128 Gene3D - 18 187 IPR035897 -
Mtr2g1490 1128 Gene3D Ribonuclease Inhibitor 729 874 IPR032675 -
Mtr2g1490 1128 Gene3D Ribonuclease Inhibitor 542 728 IPR032675 -
Mtr2g1490 1128 ProSiteProfiles TIR domain profile. 20 187 IPR000157 GO:0007165
Mtr2g1490 1128 Coils Coil 134 154 - -
Mtr2g1490 1128 Pfam Leucine Rich Repeat 615 634 IPR011713 -
Mtr2g1490 1128 PRINTS Disease resistance protein signature 222 237 - -
Mtr2g1490 1128 PRINTS Disease resistance protein signature 295 309 - -
Mtr2g1490 1128 PRINTS Disease resistance protein signature 385 399 - -
Mtr2g1490 1128 PRINTS Disease resistance protein signature 704 720 - -
Mtr2g1490 1128 Gene3D - 350 434 IPR042197 -
Mtr2g1490 1128 SMART till_3 21 161 IPR000157 GO:0007165
Mtr2g1490 1128 Pfam NB-ARC domain 210 404 IPR002182 GO:0043531
Mtr2g1490 1128 Pfam TIR domain 22 202 IPR000157 GO:0007165
Mtr2g1490 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 444 IPR027417 -
Mtr2g1490 1128 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1490 Mtr-Chr2 16464637 16471258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1490 18 858 WRKY Transcription Factor Family AT4G12020 31.366 4.09e-93 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1490 - - mtr:MTR_2g037140 1900.18