Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1477 ATGACAAGTGAAAAAGAACAACCCATTTATACTCATATGGTTGTTGTACCTGAGTTGAGAATCACAAATTTGGTTGATTTGAACAATCTTCCAAACAATGAACCATGTGGTAATTCAGAAAGTGGAGTAGTTGAGTTGAGTAGCAATGAACAAGAAGCAATTACTATTGAAAACGATTTTGAACCTTTTATAGGGCAGTGTTTTCTAAGTGAGGAAGAAGCTTTCAAATTTTATGAGAATTATGCCAAAAGGAGTGGGTTCTCAATTAGAAAAGGTAGGTTTGTTAATAAAAATGGGATAATGCACAGGAGAGATTTGTTTTGTCACCGCGGAGGATTTCCTGATAAAAAAATTCAAGATCCGTCTAAAGAACAACGAAATAGACCATCTTCGAGATGTGGATGCAAGGCAAGCATGACAATCAAATTGAAGAAATCCTTCGAGATTTTTCCAGAAGAGTGGCAGGTTTTTGAATTTATATCTAACCACAATCATGATTTACTACCTTCAGATCAAGTGCACTTCCTTGCATCTTACCGCAAAATTTCTAAGGAAGAAGAGAAGCGGATATTGCTATTAAAAGAAGCCGATCTTTCAGTCAAGCAAATAATGCGTGTTATGGAGCTTGAGAAAAATGTAAAACATGGAGATCTTCGATTTCTTGAGAAAGATATTCATAATTTCTTTAATAAGATTCATCAAGATAACATGAATGGTGATGCTAATGATCTTTTACAACTTTGTAAGTTATCCAAGGAAGAAAACTCATGCTTCCAATTTGAATTTACGGTTGATAAAGAAAAAAGACTAGAAAATATATTTTGGTCTCCACCTCATTGTTTTGAATTGTACCAACAGTATGGAGATGCTGTTGCATTTGATACTACTTACAAGGTAAATACTTATAATATGCCTTTTGGCATTTTTGTTGGAGTCGACAATCACGGCAGAACAATATTGTTTGGTTGTGCGCTCATTCGAAATGAAACGGTGTCTACATTTCAATGGTTAATGAAAACTTTTGTTACTCTCATGAAGAAGCCTCCAAAGACAATCATTACTGATCAAGATCCATGGATGACTCAAGCTATTGCTTTTGAAATGCCATCCACAAAACATGCTTTTTGTATATGGCACATTACTGCTAAATTTAGTGGTTGGTTTACTTCAATTCTTCGAAATAGATATTTCTCATGGTGTGCTGATTTTTATAAGCTTTACAAGCTTGACAATATTGATGATTTCGAAGAAGAATGGATTATAATTGTTTCCAAGTACAATCTAGAAGCAAATAAGCACATAAAAGGCTTGTATGAAGTTAAGCAACATTGGGTTCCGGCGTATCTTCGTGGACATTTCTTTGGGGGCATGACAACAACTGGAAGATCAGAGAGCATAAATGGATTCCTAAAACGCTTTACTTCATCTCGTTCATGTTTAACTCAACTTTTCAAACAAGTTGATCTGGCCATTGAGGACATTGGGCAAAAACAATTACATCATACCATGTTGGATACATACAGGGGATCATCACTTCGATCTTTATCCCCGTTAGAGGAGCAAGTTTACAATATTTTCTCAAAATATGCTTTCAAGAAGTTTCAGGAGGAGTTTGAGAGGGCAACTCAATACAAGATTTGTGAAGAAAATCATGTAGAATTTACTGTGAAATATTACAAGGAGCAACATTCACAAAAGCATAAAGTCTTATGGGATGGTGATGTGGTTGGTTGTAGTTGCAAGCACTTTGAGTTTTGGGGTATTCTTTGTCGTCATGTATTGACAATATTCCTTCATAAAGATTGTTTTGAGATTCCAACAAGTTACTTGCCATTACGTTGGTGTCGTGATGAATTTCAAAGACCGGTTGAAGTAAATATGATGCTTAGTGAAGGAGGGCCTATTGAGAATGTGGAGAATACAGTGGACTTAATTAAAAATCCGCCAAGGTCTAATACAAAAGGTCGTCCCAAAACAAAACGATCAAAAGGAGGAATGGAATTGTCAAAGAGAGCAAGAAGTTGTACTTTTTGCAAGAGAAGGGGGCACAATGTTACAACTTGTCCGGACAAAGAAAGTTATGTTCAACCAACAATCACCAAGAAGAGGAAGAATGAAGATCAAACACAACAAAATTTGAATCCTGTTTTTTATCTAAAGTCTTAG 2166 0.355 MTSEKEQPIYTHMVVVPELRITNLVDLNNLPNNEPCGNSESGVVELSSNEQEAITIENDFEPFIGQCFLSEEEAFKFYENYAKRSGFSIRKGRFVNKNGIMHRRDLFCHRGGFPDKKIQDPSKEQRNRPSSRCGCKASMTIKLKKSFEIFPEEWQVFEFISNHNHDLLPSDQVHFLASYRKISKEEEKRILLLKEADLSVKQIMRVMELEKNVKHGDLRFLEKDIHNFFNKIHQDNMNGDANDLLQLCKLSKEENSCFQFEFTVDKEKRLENIFWSPPHCFELYQQYGDAVAFDTTYKVNTYNMPFGIFVGVDNHGRTILFGCALIRNETVSTFQWLMKTFVTLMKKPPKTIITDQDPWMTQAIAFEMPSTKHAFCIWHITAKFSGWFTSILRNRYFSWCADFYKLYKLDNIDDFEEEWIIIVSKYNLEANKHIKGLYEVKQHWVPAYLRGHFFGGMTTTGRSESINGFLKRFTSSRSCLTQLFKQVDLAIEDIGQKQLHHTMLDTYRGSSLRSLSPLEEQVYNIFSKYAFKKFQEEFERATQYKICEENHVEFTVKYYKEQHSQKHKVLWDGDVVGCSCKHFEFWGILCRHVLTIFLHKDCFEIPTSYLPLRWCRDEFQRPVEVNMMLSEGGPIENVENTVDLIKNPPRSNTKGRPKTKRSKGGMELSKRARSCTFCKRRGHNVTTCPDKESYVQPTITKKRKNEDQTQQNLNPVFYLKS* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1477 721 Pfam MULE transposase domain 291 382 IPR018289 -
Mtr2g1477 721 Pfam SWIM zinc finger 578 600 IPR007527 GO:0008270
Mtr2g1477 721 Pfam FAR1 DNA-binding domain 76 169 IPR004330 -
Mtr2g1477 721 ProSiteProfiles Zinc finger SWIM-type profile. 554 601 IPR007527 GO:0008270
Mtr2g1477 721 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 632 IPR031052 GO:0006355
Mtr2g1477 721 MobiDBLite consensus disorder prediction 701 721 - -
Mtr2g1477 721 MobiDBLite consensus disorder prediction 112 132 - -
Mtr2g1477 721 MobiDBLite consensus disorder prediction 112 130 - -
Mtr2g1477 721 MobiDBLite consensus disorder prediction 645 668 - -
Mtr2g1477 721 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 60 632 - -
Mtr2g1477 721 SMART 26again6 576 603 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1477 Mtr-Chr2 16278726 16281530 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g1477 FAR1 1.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1477 - - gsj:114409893 803.897