LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1474	ATGGCTATGCAAATAAATATAGGTGCTTCTTCTTCTTCTACTTTGGAGGTGGCTTCAAATTCTTTTGATGTTTTTATTAGCTTTCGTGGTGATGATACTCGTAGAAAATTCACAAGCCATCTTAATGAAGCTTTGAAAAAGAGCGGTGTTAAGACATTTATAGACGACAGCGAGCTTAAAAAAGGAGATGAGATCTCATCAGCACTGATCAAAGCCATTGAAGAGTCATGTGCATCTATAGTCATCTTTTCAGAAGACTATGCTTCTTCAAAATGGTGTTTGAATGAACTCGTCAAGATTCTAGAATGCAAGAAAGATAATGGACAAATTGTGATACCAATTTTCTATGAAATAGATCCATCTCATGTGAGAAATCAGATTGGGAGTTACGGGCAAGCCTTTGCAAAGCATGAGAAGAATTTGAAGCAGCAGAAATGGAAAGATGCTCTCACCGAAGTCTCCAATTTATCTGGGTGGGACTCTAAAAGTTCAAGGATTGAATCAGACTTCATTAAGGACATCGTTAAAGATGTTTTGGAAAAACTGAATCAGAGACGCCCAGTTGAAGCCAATAAGGAACTTGTTGGAATTGAAAAAAAATATGAAGAGATTGAATTGTTAACGAATAATGGGTCAAATGATGTTAGAACGCTTGGATTATGGGGCATGGGGGGCATAGGAAAGACCGCTCTAGCAAAAAAATTATATGATAACTATTGTTCTCAATTCGAATATCATTGTTTCCTCGAAAATGTAAGGGAAGAATCAACTAAGTGTGGACTCAAAGTTGTACGTAAGAAGCTGTTTTCTACATTGTTGAAGCTTGGTCATGATGCGCCTTATTTTGAAAACCCAATTTTCAAAAAAAGACTTGAACGTGCAAAATGTTTGATTGTGTTGGACGATGTTGCAACCTTAGAGCAAGCAGAAAATCTAAAGATTGGTCTGGGACCAGGTAGTAGAGTCATTGTCACAACAAGAGATAGCCAAATATGTCATCAATTTGAAGGATTTGTGGTACGTGAGGTCAAGAAATTGAATGAAGATGAATCTCTTCAACTATTCAGTTGTAATGCATTTCAAGAAAAACATGCTAAAGAAGGATACGAAGAGCTCTCAAAAAGTGCAATTGGATATTGCAGAGGCAATCCTCTAGCTTTGAAAGTTTTAGGTGCGAATCTTTGTGCAAAAAGCAAAGAAGCATGGGAAAGTGAATTGGAAAAGATAAAAGAGATTCCTTATGCAGGAATTCATGATGTGTTAAAATTGAGTTTCTATGACTTAGATCGTACTCAACGTGACATATTTCTAGACATTGCCTGCTTCTTCTACCCAACAATAAATGAATTTGATTGTTATACACAGCGAGAATACATAATAGATCTATTTAATGCTTGTAAATTTTATCCAGCAACTTCAATAGAAGTCCTTCTTCATAAATCACTCATGACTTTTGGATATTGTGATCGAATCCAAATGCATGATTTGGTCGTAGAAATGGGACGAGAGATTGTTAAGCAAGAAGCTCCGAAAGACCCCGGAAAAAGAAGTCGATTGTGGGATCCCGAGTTAATTTATGAAGTATTTAAATACAACAAGGGAACTGATGCTGTTGAAGTTATACTATTTGATACTTCTAAAATTGGTGATGTATACTTGAGCTCCAGATCCTTTGAGAGCATGATCAACTTAAGATTACTTCATATCGCCAATAAATGCAACAATGTGCATCTCCAAGAAGGTCTTGAGTGGTTGTCTGATAAATTGAGCTACCTTCATTGGGAATCATTTCCACTTGAGTCTTTGCCATCAACCTTTTGTCCTCAAAAGCTTGTAGAACTTAGCATGACCCATAGCAAGCTTAGAAAGCTTTGGGATAGAATTCAGAAGCTTGACAATTTAACAATCATTAAACTTGATAACTCTGAAGACCTGATTGAGATTCCGGACTTATCAAGAGCACCGAATCTTAAAATATTATCTCTTGCTTATTGTGTAAGTCTCCATCAACTCCATCCATCCATTTTCAGTGCCCCCAAGCTTAGAGAACTATGCTTAAAAGGTTGTACAAAGATTGAAAGCCTTGTAACTGACATTCATTCAAAATCTCTCCTAACACTGGATCTCACTGATTGTTCATCCCTCGTTCAATTTTGTGTGACATCAGAAGAAATGACATGGTTGTCGTTACGTGGCACAACTATCCATGAATTTTCATCATTGATGTTGCGTAATAGCAAACTAGACTATCTTGATCTAAGTGATTGTAAGAAGCTTAACTTTGTTGGGAAGAAGCTATCAAATGATCGAGGATTAGAGTCTCTTTCAATATTGAACCTTTCAGGATGCACGCAAATCAATACATTGAGTATGTCGTTCATCCTTGATGGCGCACGATCTTTAGAATTTCTATATCTGAGAAATTGTTGCAACTTAGAAACCCTCCCTGACAACATCCAAAACTGTTTAATGTTGAGTTTCCTTGAATTAGATGGTTGCATAAACCTTAATTCACTACCAAAGCTTCCTGCATCCTTGGAAGATTTGAGTGCCATTAACTGCACTTATCTGGACACAAACTCCATTCAAAGAGAAATGCTTAAGAACATGTTATACAGATTCCGCTTTGGTGAACCTTTTCCAGAATACTTTTTATCTTTACTTCCAGTTGCCGAAGTTCCATGGGGGTTTGATTTCTTCACAACGGAGGCTTCAATCATTATTCCTCCTATTCCAAAAGATGGATTGAATCAAATTGTTTTATGCGTCTTTCTCTCTGAGGGGTTAAATCTTACTTTTTCCGGAGTTGATTGTACTATATATAATCACGGAGACAGAAGCAACGAATGGAGTATAAGTTTTGTGAATGTGAGCGGGGCAATGATTTCAGACCATGTACTGCTAATCTGTTCGCCTGCTATTTGCCATCAGACGAGGGTGGATAATGATCATTACAGCCTTTCATTTGAAGTCAAACCTTATGGTAAAGTCGGGGAACAATTGTCGTCAACTAAGGGGATAAAGGGTTGTGGGGTCATCCTTGTACCTAGCTTGGAACGTAGTTTGGGGTTGGATGGTAGTAGTAGCCGAAGTAAAGTTGAAATTGTTGAATTACCCTTCAATGCTCATCAAGTTTCTGATGAGTTTGATCAACATTCAAATATTGATGATGATGAAAATGAAGATGCCCAACAACAACTTCTTATTACCCCAAAGAAAATGAGGAAGACTTGA	3234	0.3723	MAMQINIGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGVKTFIDDSELKKGDEISSALIKAIEESCASIVIFSEDYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRNQIGSYGQAFAKHEKNLKQQKWKDALTEVSNLSGWDSKSSRIESDFIKDIVKDVLEKLNQRRPVEANKELVGIEKKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREESTKCGLKVVRKKLFSTLLKLGHDAPYFENPIFKKRLERAKCLIVLDDVATLEQAENLKIGLGPGSRVIVTTRDSQICHQFEGFVVREVKKLNEDESLQLFSCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDIFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGYCDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLSSRSFESMINLRLLHIANKCNNVHLQEGLEWLSDKLSYLHWESFPLESLPSTFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCTYLDTNSIQREMLKNMLYRFRFGEPFPEYFLSLLPVAEVPWGFDFFTTEASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSGVDCTIYNHGDRSNEWSISFVNVSGAMISDHVLLICSPAICHQTRVDNDHYSLSFEVKPYGKVGEQLSSTKGIKGCGVILVPSLERSLGLDGSSSRSKVEIVELPFNAHQVSDEFDQHSNIDDDENEDAQQQLLITPKKMRKT*	1078

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g1474	1077	Gene3D	-	182	340	IPR027417	-
	Mtr2g1474	1077	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	439	IPR027417	-
	Mtr2g1474	1077	PRINTS	Disease resistance protein signature	217	232	-	-
	Mtr2g1474	1077	PRINTS	Disease resistance protein signature	290	304	-	-
	Mtr2g1474	1077	PRINTS	Disease resistance protein signature	380	394	-	-
	Mtr2g1474	1077	PRINTS	Disease resistance protein signature	699	715	-	-
	Mtr2g1474	1077	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	1067	IPR044974	GO:0006952
	Mtr2g1474	1077	Pfam	NB-ARC domain	205	410	IPR002182	GO:0043531
	Mtr2g1474	1077	ProSiteProfiles	TIR domain profile.	20	182	IPR000157	GO:0007165
	Mtr2g1474	1077	Pfam	TIR domain	22	197	IPR000157	GO:0007165
	Mtr2g1474	1077	SUPERFAMILY	L domain-like	492	860	-	-
	Mtr2g1474	1077	SMART	till_3	21	156	IPR000157	GO:0007165
	Mtr2g1474	1077	Gene3D	Ribonuclease Inhibitor	536	874	IPR032675	-
	Mtr2g1474	1077	SUPERFAMILY	Toll/Interleukin receptor TIR domain	14	159	IPR035897	-
	Mtr2g1474	1077	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	17	1067	-	-
	Mtr2g1474	1077	Pfam	Leucine Rich Repeat	610	629	IPR011713	-
	Mtr2g1474	1077	Gene3D	-	345	429	IPR042197	-
	Mtr2g1474	1077	MobiDBLite	consensus disorder prediction	1044	1077	-	-
	Mtr2g1474	1077	Gene3D	-	17	181	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g1474	Mtr-Chr2	16249244	16255857	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g1474	18	853	WRKY Transcription Factor Family	AT4G12020	30.501	2.77e-91	320

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1474	-		-	mtr:MTR_2g037140	2144.01