Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1459 ATGGAAGGTCAAAAAGCTAAACGCAAACGTGTTTATTCAGTTGAACCAAACAAAGTAGTGCAAGCAAAATTTACTAAAAACTACATTAATTATTTAGCACCAGCTTTGATGAAGATCAAGGAAAGAAGAACTTCTATAGAAGCCAAGAATGTTGAAAGTGTTGTCAAGTATGAAGTGGACATGGCAATGGTTTTTTCATCTCAAGGTTTTGCATGGAGTAATGCTCTAAAAACCAAGCTTCAAAAGGATGGTGATGAAGGTTCATCAAGGATTAATTATCAACAAAATGAAATGGTCCCACTTGATTTCTCTAAAAAAATTTGTTCAAAATCTGAGGCTAATAAGATTTTGGTTGAAGAAAATATTGATGGTGATGAAGATGAAATTGTGGATGACCAATTGAGGTGTCTAAGAAAATTGATACCAGGAGGAGAAGAGATTATATGTGATGAGGAAATGGTGAATGAATTAGAGAGCTATGTAAGTTGTTTGCAAATGCAGGTGAATATTCTTCAGTGCCTCACTCATCAGACAAGTTGA 540 0.3444 MEGQKAKRKRVYSVEPNKVVQAKFTKNYINYLAPALMKIKERRTSIEAKNVESVVKYEVDMAMVFSSQGFAWSNALKTKLQKDGDEGSSRINYQQNEMVPLDFSKKICSKSEANKILVEENIDGDEDEIVDDQLRCLRKLIPGGEEIICDEEMVNELESYVSCLQMQVNILQCLTHQTS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1459 179 CDD bHLH_AtIBH1_like 120 175 IPR044549 GO:0006355
Mtr2g1459 179 PANTHER TRANSCRIPTION FACTOR BHLH146 3 177 - -
Mtr2g1459 179 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 177 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1459 Mtr-Chr2 16013096 16014111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1459 7 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 33.523 6.52e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1459 - - aprc:113852314 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4722 4 61214921 61215996 Mtr2g1459 2 16013096 16014111 PCT