Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1454 ATGGAAAGGGAAAAGCCAATAAGATTCACTAGTCAACAACTTAGGATTGCAACAGACAACTACTCCAACTTGTTAGGGTCAGGTGGATTTGGTACAGTTTATAAAGGAATTTTTAATAATGGAACAATGGTAGCTGTGAAGGTTCTACGTGGAAGTTCCGATAAGAAAATTGAAGAACAATTTATGGCAGAAGTTGGAACAATTGGCAGAATTCATCACTTCAATCTTGTTAAGCTATTTGGATTTTGCTTTGAGAAAAACTTGATAGCACTTGTTTATGAATACATGGGAAATGGATCACTTGATAGGTATTTGTTGCATGAAAAAAATGCCTTAGGTTATGAAAAGCTTCATGAGATTGCAATTGGTACGGCAAGAGGCATTGCTTACTTGCATGAATTGTGTGAACATAGAATAGTCCACTACGATATAAAACCAGGAAATATTCTCTTGGATGGGAATTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAACTTTGTAACCGGGAAAATACTCATATAACGATGACTGGGGGAAGGGGGACGCCCGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTATAACTCATAAATGTGATGTTTATAGTTTTGGTATGCTGTTATTTGAAATTGTTGGTAGGAGAAGAAACCTTGACATTAAAAATACAGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTGGAGGAGGCAATGATAGTTTGTGGAATAGAAGAGAAAAATAGAGAGATTGCTGAGAGAATGGTTAAGGTAGCTTTATGGTGTGTTCAATATAGGCAACAATTAAGGCCTATGATGAGTGATGTTGTGAAAATGTTGGAAGGTTCATTAGAAATTCCAAAGACTTTTAACCCATTTCAACATTTGATTGATGAGACTAAGTTTACAACTCATTCAGACCAAGAGTCAAATACTTATACAACTAGTGTTTCTTCTGTTATGGTAAGTGATTCCAACATTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCATCTAGCACAGAGTGA 1068 0.3633 MEREKPIRFTSQQLRIATDNYSNLLGSGGFGTVYKGIFNNGTMVAVKVLRGSSDKKIEEQFMAEVGTIGRIHHFNLVKLFGFCFEKNLIALVYEYMGNGSLDRYLLHEKNALGYEKLHEIAIGTARGIAYLHELCEHRIVHYDIKPGNILLDGNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLDIKNTESQEWFPIWVWKKFDAGLLEEAMIVCGIEEKNREIAERMVKVALWCVQYRQQLRPMMSDVVKMLEGSLEIPKTFNPFQHLIDETKFTTHSDQESNTYTTSVSSVMVSDSNIVCATPIMRKYEIELASSTE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1454 355 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 353 IPR045874 GO:0004672
Mtr2g1454 355 PANTHER PUTATIVE-RELATED 1 353 - -
Mtr2g1454 355 SMART serkin_6 19 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1454 355 Gene3D Transferase(Phosphotransferase) domain 1 96 304 - -
Mtr2g1454 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mtr2g1454 355 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Mtr2g1454 355 PIRSF TyrPK_CSF1-R 106 217 - -
Mtr2g1454 355 PIRSF TyrPK_CSF1-R 19 120 - -
Mtr2g1454 355 PIRSF TyrPK_CSF1-R 247 347 - -
Mtr2g1454 355 ProSiteProfiles Protein kinase domain profile. 19 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1454 355 Pfam Protein kinase domain 23 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1454 355 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Mtr2g1454 355 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1454 Mtr-Chr2 15924776 15926231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1454 8 321 Receptor kinase-like Gene Family AT5G38280 41.049 8.65e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mtr2g1454 Pkinase 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1454 - - gmx:100803355 605.52