Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1452 ATGGTTTTCACTATCAATCAACTTTATGTGCCTCCTCCTCCTTGCTACTGTGAAATGGGCTGTAGCATAACATGTAGTGTATGGAGTGGTAATAATTGTTTCATAGATGCAATTATTGAGTGCTGGAAGAAAGGAGCAACAACAATGTCTGCTTACACTCAGATTCAAACCACAGAGAAAGTTGATGATTTTCCAATGAGATTCACACCAGAACAACTTGATGAAATTACAAACAAGTGCAACTACACTTCTTTTTCTTTTGGTAAGATGAGACAACACAAAACCATGTTAGGTTCTAGTGCTTCTGGAACTGACTTCAAAGGAGAATTATCAAATGGACAAAAAGTTGCAGTCAAAGATTTCAACTGTTTTATAATGGGAATGGAAGAACAATTCATAGAAGATGTTAGCACAATTGCAAGAATTCATCATACCAATATAATCAAAGTTTATGGCTTCTGCCTTCACCGTGATAAAAATGCACTTGTTTATGAGTATGTTGAAAATGGTTCTTTAGCCAAGTACCTATTCGACAGCAAGAACTGCGATGACTTAGATTTTGAAAAGCTACGTGATATTGCGATTGGAATAGCTAAAGGAATTTCTTATTTACATGAGGGATGTGAATATAGAATAATTCATTATGATATTAGACCAGAAAATATTCATCTTGACAAGGAATTTGTACCAAAGGTAGTTAATATTGGATTGTCAAAGCTTCGAAGTAGAGAAAGTCACATTGCAATGAATAATCGTTTTAAAGGAAAAGCAGCTTATGCAGCACCTGAAATGTGGAAGGCTTATCCAGAAACATATAAATGCGATGTTTATAGTTTTGGTATTGTTCTATTTGAAATTGTAGGTAGAAGAACGCATTTTATTGATCCTACATATAGTGAATCACAAATTTGGTTTTCAAAAAGGACATGGGAAATGTTTGAGAATAGTGAATTGGTTGCTATGCTTGAATTTTGTGGAATTGAAGAGAAAGATACTGAGAAAGCTGAGAGAATGTTAAAGGTTGCTCAATGGTGTGTTCAATATTCACCAGATGATAGACCTTTAATGAGTACTGTTGTGAAGATGTTGGAGGGTGAAAAAGAAATTTTACAGGCTCCATTTCCCTTCCATAATCGGGTTTCGGTTAAAGAAAATTCGACACAAGAGGGGAGCACTGCATATTCTAATACTGCAACCTCATCATGGCATACATAA 1215 0.3506 MVFTINQLYVPPPPCYCEMGCSITCSVWSGNNCFIDAIIECWKKGATTMSAYTQIQTTEKVDDFPMRFTPEQLDEITNKCNYTSFSFGKMRQHKTMLGSSASGTDFKGELSNGQKVAVKDFNCFIMGMEEQFIEDVSTIARIHHTNIIKVYGFCLHRDKNALVYEYVENGSLAKYLFDSKNCDDLDFEKLRDIAIGIAKGISYLHEGCEYRIIHYDIRPENIHLDKEFVPKVVNIGLSKLRSRESHIAMNNRFKGKAAYAAPEMWKAYPETYKCDVYSFGIVLFEIVGRRTHFIDPTYSESQIWFSKRTWEMFENSELVAMLEFCGIEEKDTEKAERMLKVAQWCVQYSPDDRPLMSTVVKMLEGEKEILQAPFPFHNRVSVKENSTQEGSTAYSNTATSSWHT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1452 404 PANTHER RUST RESISTANCE KINASE LR10-RELATED 41 381 IPR045874 GO:0004672
Mtr2g1452 404 MobiDBLite consensus disorder prediction 384 404 - -
Mtr2g1452 404 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-RELATED 41 381 - -
Mtr2g1452 404 Gene3D Transferase(Phosphotransferase) domain 1 167 380 - -
Mtr2g1452 404 Pfam Protein tyrosine and serine/threonine kinase 94 363 IPR001245 GO:0004672|GO:0006468
Mtr2g1452 404 Gene3D Phosphorylase Kinase; domain 1 44 166 - -
Mtr2g1452 404 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1452 404 SUPERFAMILY Protein kinase-like (PK-like) 93 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1452 Mtr-Chr2 15918463 15920205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1452 85 373 Receptor kinase-like Gene Family AT5G38260 37.458 2.47e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mtr2g1452 PK_Tyr_Ser-Thr 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1452 - - mtr:MTR_2g036480 842.417