Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1449 ATGTCATCCTCGGAAGCTATTGCAATTGAGGCTGTTCTAGTCATAGTAGTGATTGTCGCGAAGGTAGCTATTTTAATCTGTGTGTGTAGAAAAAGAAATCAAGTAAATGGTGGAACCATTAGTCCAGATTCACAATTTATAACACTCACTATGGATAAATTTTTAAACGACATGGAAAGGGAGAAGCCGATAAGATTCACCGGTCAACAACTAAGAATTGCAACAGACAACTACTCGAACTTGTTAGGGTCAGGTGGATTTGGTACAGTTTACAAAGGAATTTTCAGTAACGGAACCATGGTAGCTGTGAAGGTTTTGCGTGGTAGTTCTAACAAGAAAATTGACGAACAATTTATGGCAGAAGTTGGAACAATCGGTAGAATTCATCACTTTAATCTTGTTAGGTTATATGGATTTTGCTTTGAAAGAAACTTGATAGCGCTTGTTTATGAATACATGGGAAATGGATCACTTGATAGGTATTTGTTTCATGAAACAAAAGTGTTAGGATATGAAAAGCTTCATGAGATTGCAATTGGTACGGCAAGAGGCATTGCTTACTTGCACGAAGAGTGTCAACATAGAATAATCCACTATGATATAAAACCGGGAAATATTCTCTTGGATAAGAACTTCTATCCTAAAGTCGCTGATTTTGGTTTGGCCAAAAATTGCAACAGGGAAAATACTCACATAACAATGACCGGGGGAAGGGGGACGCCTGGTTACGCCGCACCTGAACTTTGGATGCCATTTCCTATAACTCATAAATGTGATGTTTATAGTTTTGGTATGCTATTATTTGAAATTATAGGTAGGAGAAGAAACCTTGACATTAAAAACACTGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTTTTGGGGGAGGCAATGATAGTTTGTGGAATAGAAGAGAAAAATAAAGAGATTGCTGAGAGAATGATTAAGGTAGCTTTATGGTGTGTTCAATATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTGAAAATGTTAGAAGGTTCATTAGAAATTCCAAAGACTTTTAACCCATTTCAACATTTGATTGATGGGACTGAGTTTACTACTCATTCAGTGCAAGAGTCAAATACATATACAACTAGTGTTTCTTCTGTTATGGTAAGTGATTCCAGCATTGTATGTGCTACTCCTATTATGAGGAAATATGAGATTGAATTGGCATCTAGCACAGCTTGA 1239 0.3697 MSSSEAIAIEAVLVIVVIVAKVAILICVCRKRNQVNGGTISPDSQFITLTMDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKVLGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLDIKNTESQEWFPIWVWKKFDAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIPKTFNPFQHLIDGTEFTTHSVQESNTYTTSVSSVMVSDSSIVCATPIMRKYEIELASSTA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1449 412 Gene3D Phosphorylase Kinase; domain 1 50 152 - -
Mtr2g1449 412 SUPERFAMILY Protein kinase-like (PK-like) 59 347 IPR011009 -
Mtr2g1449 412 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Mtr2g1449 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mtr2g1449 412 Gene3D Transferase(Phosphotransferase) domain 1 153 357 - -
Mtr2g1449 412 Pfam Protein kinase domain 80 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1449 412 PANTHER PUTATIVE-RELATED 2 411 - -
Mtr2g1449 412 ProSiteProfiles Protein kinase domain profile. 76 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1449 412 SMART serkin_6 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1449 412 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 411 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1449 Mtr-Chr2 15902595 15904117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1449 65 367 Receptor kinase-like Gene Family AT5G38280 40.625 6.86e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mtr2g1449 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1449 - - gmx:100803355 669.077