Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1420 ATGGAAGACACAAATAAGAAGGGAGAAGAAGAAGTGAGGTACCGTGGTGTAAGGAGAAGGCCATGGGGAAAATATGGGGCTGAGATTCGAGACCCAACGAAGCCAACTGGAAGACAATGGTTAGGTACATTTGACACAGCTGAAGAAGCAGCTAGAGCTTATGATTGTGAAGCTATTCGTTTGAGGGGTGCTCTTGCCATTCTTAATTTTCCGGACGAATACTTTTTTCATCTTTCTTCTTTATCGTCGGCGTCATCATCGTCACCATCTACTAATGACAATGCCAATGCATCCTCTTCTTCTACACAACATAAGGATGTTATTGAGTTTGAGTATTTGGATAATAAGGTGTTGGAAGATCTTCTTGGATCATCCAAAGAATATAATGAAAGGAAGCAATAG 402 0.4104 MEDTNKKGEEEVRYRGVRRRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDCEAIRLRGALAILNFPDEYFFHLSSLSSASSSSPSTNDNANASSSSTQHKDVIEFEYLDNKVLEDLLGSSKEYNERKQ* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1420 133 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Mtr2g1420 133 PANTHER DNA-BINDING DOMAIN 1 127 IPR044808 GO:0003700|GO:0009873
Mtr2g1420 133 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
Mtr2g1420 133 PANTHER ETHYLENE RESPONSE FACTOR 1 127 - -
Mtr2g1420 133 MobiDBLite consensus disorder prediction 82 102 - -
Mtr2g1420 133 SUPERFAMILY DNA-binding domain 13 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1420 Mtr-Chr2 15470590 15471290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1420 9 124 AP2-EREBP Transcription Factor Family AT3G23230 56.667 2.31e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g1420 AP2 5.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1420 - - gmx:100796977 159.458