Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1410 ATGGAGATGAGCTGCCCATCAAATGTTAACAGCGATGTCTCCGTGTGTTCTACTAGCACAGTTAATATTTCACACTCACACCAGAGTTTCCGTGGCTTTGTGCAACAGCCTGATTTTGTCAGTGGATGGATGTATGTGAACGAACATGGACAAATGTGTGGTCCCTATATTAAGGAGCAGTTACATGAGGGCTTAACTACAGGTTTCTTGCCATTTGAGCTTCCTGTGTATCCTGTGATCAATGGCACAATAATGAACTCTGTACCGTTGAATTATTTTAAACAGTATCCTGACCATGTTTCCACCGGGTTTGCATATTTGAGCATGGATTTTTCTAACGCAAGGATGTCGAAAAATTGCTCATCTTCTTCTCAGGATATGGTAGATGGGCAAGATAGGTCTGTTGAGCTTGCTGCTGTTATGGCTGTTAACCCTGATTCAAAGTCTGTTTCACACGTCAATGACTGCAATAAGGAATCCAATCATGTGGATTTAAGCTCAGAGGCATTTAGCAGGATAATTTCTTCTCAGATGTTGGGAGGAGAATGCTGTTGGCTTTATGAGGATAAAAAGGGTATGAAACATGGGCCACATTCCATTTCAGAGCTGATTTCCTGGCACCACCATGGATATCTTGAAGATTCAACAGTGATCTCTCATTTTGACAATAAGTATGGAACCTTTGTGTTGCTGTCTGCTGTAAATGCAATGAAAGGAGATACATGTGGAACCATCTGTGGATCAGATTCCAAAAGCAATGGAGTTGGTGATGTCATGAACTTAATTTGTGAAATATCTGAAGACATTTCTTCCCAATTGCACACGGGTGTAATGAAATCTTCCCGTAAAGTTGTGCTAGATGGGATTATTGGCGATATCATTGCAGAGTTTATTACTGAAAAGAAATGCAAGAAGCAAAAACTTGAGTCTGCTGATCAAACTTCTGAAACTTGCACGTTGAACAATAAAATGATGAATAAAGGTGCTTCCATTCCAAGTGAGCCTGCAGCTTCCCGTATTTTGAATGGTCAGGCCTGTCATGAAATTTCCAGACCGTCTTCAACGAATGTTAAGTCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTTTGATCATTCCTTGCAAGTCATGTGGAATGCAGTGTTTTTTGACACGGTGACGGAGGTCTTATTTTCCTGGAGGAAGAAGAAATATTGGTCTCATCCTAAGCCTCAATCATCTGTCAATGAATCTAAAGATTCTGTCGAAAAGTTAAAATCAGAAGCTTTGGCTCTCGGGACAGGTTCCTCTGTATGCAATGTTGAGGCTGATATCCAGTCTGGAGCTATGGCGACAGAAAGAGATTGTCATCCTGAGTTACTTTTATCTCCTAATAACATTAAAATTGGAAATATAGCAGAAGGTCAAAGAGTTTCATGCAGTTATGGTAACTCTGAAGATTTGACACGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTGCTCTGCAAAGGCGTCTTTAGCTGATTATGTTCGAAGTGTTGTTGAAAAGGAAGTAAACCAATTAATTCCTTCCCCAGAGAAAGACATATTTAGCGAGTTGCAGGTTGATGTTAGTGACTGCCGTATCTCAAAGATGGTTGCCGGTAAAACATCTGTTAAAGAAACTCTAAGTGACAAGTCTATCGATCCTGTGAAAAATGGAGACTCAATTTGCGTCCCTTCATCTGAAAATCATATGTCCGATGTATTCTCAAAAGCATTTCAAGAATTGTGTGGACATTTAAATGATGTGGTTGATGATGAGGAGATTGGTGACCTACCACCTGGATTCGAAAAGAACTCAATATTCCCACACTGCAATTCAAAATTTCGACCTTCAAGAACAGTTGAATGTAATCCTAAGATTACAGAATATGTTACAGCTGCACTGTGCAGACAGAAGCTGCATGATGAAGTTCTAAAAGACTGGAAGCTGTCGATTCTTGATTCTACATTTAAAAAAGTTATGTCATCATGTACGATAAAGAAGAATTTACAGTCTCGTGGTCATGGGAAGGGGAAGTCGTTCAGTGCAAACAAGGAGCATTTGAATGATGCTACTTTGGGACTAGGAAAAGTGAAGGAAGGCACAAAATTGGGACTAGGAAAAGTGAAGGAAGGCGCAAAAAGTTCTGGAGTTCCTCTGGCGATTGAAAAGTATACGTATCACCGCAAGAATCTGTCACGGAAAGAGCTTTGCTCCTCTAAGCCCGTTGTAGACGATAATTCAGGTCCAGGGAAGAAGCCTTTGGCTAAGTTAAGGAAAGATGTTTCTGGAGATGTGAAGGAGAGTGCAGAAGTTAAAGTAACTGCTATTAAACGTGGAAAGGCTAAGATGATTAAAGGGAAGAAGGATACATCTTCTAAGAAGAGCTCTCCTGTCAATGTCGATAATAGCTCACCCAGTGTTCAATTATCCTTGAAGAATAAAACTTGCCAGAAAGTATCCAAGTTTGCACATACAGTTCAAAACGGTGTTACAGATGTTCTGAAGTCTAATAAAAAGAGGCTCTTGGTGTCATCTGATAATAGTGTTGGTATGAAGGTGGTTAAAAGAAATAACACTGATGTCACCATTCAGAGGAAGACCACTGGTCATATCTCCAAAGAGAAACTAAATGCGACAAATACAGTATCAAAATCCAAAAGAAAGCATCAGCCAGATGGTGTTACATCCTCTCATCCCGCAAAGGTTTTGAAAATTTCAAATAGCGGTGCAAGTCTGGAAGCCAGCAAACAAGTAACTGAGGCACGGAGGAATTCTGCTAAATCTAAGTCATTGGATTTGTGTCCTAGATCTATTGGATGTGCTAGGACTTCTATTGATGGATGGGAATGGCATAAATGGTCTCAAAGTGCTAGTCCCACAAGTAGAGCACGTGTCAGGGGTCTTCCGCGTTTACAAAACAAGTTCATAAATTCTGAAAAAAATCCATCTCAGTTGTCAAATAGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAGTTACGTAACCTTCTTGCTGCAGCTGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAAAAGCGACTACGTTTTCAAAGGAGCAAGATACACGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAAGCAGAGGACTTTGTCATTGAGTATATCGGAGAATTAATTCGTCCTCGGATATCTGATATACGTGAGGTTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTCAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCACGATTTATTAACCATTCTTGTGAGCCCAACTGTTACCCAAAGGTTATATCTTTTGAGGGTCAAAAGAAGATTTTTATATATGCCAAACGGCATATAAATGCCGGTGAAGAAATTACATACAATTATAAGTTTCCCTTGGAGGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGCCGTGGATCAATGAACTAG 3522 0.4035 MEMSCPSNVNSDVSVCSTSTVNISHSHQSFRGFVQQPDFVSGWMYVNEHGQMCGPYIKEQLHEGLTTGFLPFELPVYPVINGTIMNSVPLNYFKQYPDHVSTGFAYLSMDFSNARMSKNCSSSSQDMVDGQDRSVELAAVMAVNPDSKSVSHVNDCNKESNHVDLSSEAFSRIISSQMLGGECCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTVISHFDNKYGTFVLLSAVNAMKGDTCGTICGSDSKSNGVGDVMNLICEISEDISSQLHTGVMKSSRKVVLDGIIGDIIAEFITEKKCKKQKLESADQTSETCTLNNKMMNKGASIPSEPAASRILNGQACHEISRPSSTNVKSVGSIENFWWSYAVVRKVLFDHSLQVMWNAVFFDTVTEVLFSWRKKKYWSHPKPQSSVNESKDSVEKLKSEALALGTGSSVCNVEADIQSGAMATERDCHPELLLSPNNIKIGNIAEGQRVSCSYGNSEDLTRILESVENELHCSAKASLADYVRSVVEKEVNQLIPSPEKDIFSELQVDVSDCRISKMVAGKTSVKETLSDKSIDPVKNGDSICVPSSENHMSDVFSKAFQELCGHLNDVVDDEEIGDLPPGFEKNSIFPHCNSKFRPSRTVECNPKITEYVTAALCRQKLHDEVLKDWKLSILDSTFKKVMSSCTIKKNLQSRGHGKGKSFSANKEHLNDATLGLGKVKEGTKLGLGKVKEGAKSSGVPLAIEKYTYHRKNLSRKELCSSKPVVDDNSGPGKKPLAKLRKDVSGDVKESAEVKVTAIKRGKAKMIKGKKDTSSKKSSPVNVDNSSPSVQLSLKNKTCQKVSKFAHTVQNGVTDVLKSNKKRLLVSSDNSVGMKVVKRNNTDVTIQRKTTGHISKEKLNATNTVSKSKRKHQPDGVTSSHPAKVLKISNSGASLEASKQVTEARRNSAKSKSLDLCPRSIGCARTSIDGWEWHKWSQSASPTSRARVRGLPRLQNKFINSEKNPSQLSNSKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIREVQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYPKVISFEGQKKIFIYAKRHINAGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1410 1173 Gene3D SET domain 866 1173 IPR046341 -
Mtr2g1410 1173 MobiDBLite consensus disorder prediction 889 940 - -
Mtr2g1410 1173 Pfam SET domain 1046 1150 IPR001214 GO:0005515
Mtr2g1410 1173 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1173 IPR044570 GO:0042800|GO:0051568
Mtr2g1410 1173 CDD SET_SETD1 1022 1169 - -
Mtr2g1410 1173 SMART PostSET_3 1157 1173 IPR003616 -
Mtr2g1410 1173 ProSiteProfiles SET domain profile. 1034 1151 IPR001214 GO:0005515
Mtr2g1410 1173 ProSiteProfiles Post-SET domain profile. 1157 1173 IPR003616 -
Mtr2g1410 1173 SUPERFAMILY SET domain 1030 1170 IPR046341 -
Mtr2g1410 1173 Gene3D - 174 249 IPR035445 -
Mtr2g1410 1173 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1173 - -
Mtr2g1410 1173 MobiDBLite consensus disorder prediction 911 930 - -
Mtr2g1410 1173 SUPERFAMILY GYF domain 179 237 IPR035445 -
Mtr2g1410 1173 ProSiteProfiles GYF domain profile. 182 232 IPR003169 GO:0005515
Mtr2g1410 1173 MobiDBLite consensus disorder prediction 748 770 - -
Mtr2g1410 1173 SMART set_7 1034 1157 IPR001214 GO:0005515
Mtr2g1410 1173 MobiDBLite consensus disorder prediction 792 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1410 Mtr-Chr2 15348784 15363435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1410 1033 1173 C2H2 Transcription Factor Family AT2G23740 35.583 4.37e-17 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr2g1410 SET 3.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1410 - - gmx:100805708 1533.08