LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1382	ATGGCTTCTTCTTTTCCACTTTATCAAACAAGTTTCTTCTCAAAAACCCAGTTCAAAGGTTTGCGCCATGGTTATTTGTGGCGACCCACTTACTCTTTTGGTTCTTGTGCTGAAAACAAAGTACAACCTGTTAAAGCTTCTGTCGAAACTGCCCCATTTCCCTTGTTTCAGCCTCCTAAAGATGAAGAAACAGCTTCTCAGTTGGAGCCTGTAGATCCTGATTTCTACAAGATAGGATTCGTCAGAAGTATGCGAGCTTATGGAGTTGATTTTATGGAAGGGCCAAATGGTTTCGGTGTATATGCTTCTAAAGATGTCGAACCTCTTCGCCGACCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAACTACCATGGATGTTTTTCCCTGATATAATTCCCCTTGGTCATCCAATATTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGGATTTACGATTAGCATGCCTTCTCTTGTTTTCATTTGACTGCAAAGACAACTTTTGGCAGTATTACGGTGACTTCTTACCCAGTGAAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCCCGATCTTGCTTCTACAATGAGAGTTCAGCAACAACGAGTGTTAGAATTCTGGGAGAAGAACTGGCATAGTGGTGTGCCGCTCAAAGTAAAACGTCTTGCTCGTGATCCTCAAAGATTCATGTGGGCAGTAGGAATTGCACAGTCACGCTGTATCAACATGCAAATGAGAATGTGTGCACTAACTCAACAAGCGAATATGCTGATTCCTTATGCTGATATGCTGAACCATTCGTTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAACGGATAAGAAAGGGAGATGAGATGACAGTTGATTACATGAGTGCACAGAAGAACGGCATGTTAATGCAACGATACGGATTTTCATCGCCAGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCACAAATTCATTTGGATTCCTTTTTGTCAGTCTTCAACATATCTGGCCTTCCTGAAGAGTATTATCGTAACGAAGTTCTATCGAGCACTGGAGATACTTTTGTCGATGGAGCAGTCATAGCTGCAGCACGAACATTGCCAACATGGTCAGATGGAGATGTGCCTCCAATTCCAAGTGAGGAAAGGAAAGCTGCGAAGGCATTACAACAAGAGTGCAAACAAATGCTTGCAGAATTTGCTACCACCTCTAAGCAAGACCAGAAACTGTTAGATTCATCACCCGAAGCTACGAGAACTCTTGAAGCTACAATAAAGTATAGATTGCACAGAAAATTGTTAATGGAAAAAGTTATCCTTGCATTGGAGATCTATCAAGAGCAAATATTATTCTGA	1443	0.4116	MASSFPLYQTSFFSKTQFKGLRHGYLWRPTYSFGSCAENKVQPVKASVETAPFPLFQPPKDEETASQLEPVDPDFYKIGFVRSMRAYGVDFMEGPNGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLFSFDCKDNFWQYYGDFLPSEDESTSLLLATEEELLELQDPDLASTMRVQQQRVLEFWEKNWHSGVPLKVKRLARDPQRFMWAVGIAQSRCINMQMRMCALTQQANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSAQKNGMLMQRYGFSSPVNPWDVIKFSGNAQIHLDSFLSVFNISGLPEEYYRNEVLSSTGDTFVDGAVIAAARTLPTWSDGDVPPIPSEERKAAKALQQECKQMLAEFATTSKQDQKLLDSSPEATRTLEATIKYRLHRKLLMEKVILALEIYQEQILF*	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g1382	480	ProSiteProfiles	SET domain profile.	76	321	IPR001214	GO:0005515
	Mtr2g1382	480	Coils	Coil	415	435	-	-
	Mtr2g1382	480	Pfam	Rubisco LSMT substrate-binding	409	461	IPR015353	-
	Mtr2g1382	480	Gene3D	set domain protein methyltransferase, domain 1	80	335	-	-
	Mtr2g1382	480	CDD	SET_LSMT	88	335	-	-
	Mtr2g1382	480	SUPERFAMILY	SET domain	96	336	IPR046341	-
	Mtr2g1382	480	Gene3D	-	355	478	IPR036464	-
	Mtr2g1382	480	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	43	470	-	-
	Mtr2g1382	480	Pfam	SET domain	97	320	IPR001214	GO:0005515
	Mtr2g1382	480	PANTHER	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14	43	470	-	-
	Mtr2g1382	480	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	332	472	IPR036464	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Mtr2g1382		SET	4.6e-18	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1382	-		-	cam:101505820	869.766