Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1381 ATGCAAAAAGGATTTGAGTCTTGTGATGAATTGGAAACTAATGATTGTTTAGAAGCAAATGGTACTTGTGAAGAAGAAACACCTTGTGATGGGATGTCATTCGGATCTGAAAAGGAAATTACTGAGTATTACAAGAATTATGCTGAACGGGTGGGTTTTGGAGTTAAAAAAATAAGTTCAAAAAAAGGAGATGAGGGGAAAATGTATTTTACTTTAGCATGTAGTCGAGCTAGAAAGTATGTGAGTCGCCCAAAGAATATGTTAGAGCCAAATCCTATAACTCAAACGCAGTGTAAGGCTAGATTGAATGCGTGTATTTCTTTAGACGGAACAACTAAAATTAAAAGTGTTTTTTTTGAGCATAATCATGATCTAAGTCCAGGGAAAGCAAGGTATTTTAGATCGAACAAGAATATAGGGGCACAAATGAAGAGGAGGTTAGAACTCAATGACCAAGCTGGGATTAATGTAAGTAGAAATTTCCGATCCTTTGTTGTTGAAGCAGATGGGTATGAAAATCTCACATTTGGAGAAAAAGACTGCAGAAACTACATAGACAAAGTAAGACGACTACGACTTGGGACAGGAGATGCTGAAGCAATACAAAATTATTTTGTGAGGATGCAAAAGCAAAACAGTCAATTTTATTATGTGATGGATGTGGATGATGAAAGTCGGTTACAAAATGTGTTTTGGGCAGATGCAAGATGTAGGGTTGCATATGAATATTTTGGTGAAGTCATAACTTTCGACACCACTTACTTAACAAATAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCACGGTCAGTCTATGTTGTTGGGTTGTGCTCTGTTATCAAATGAGGATACTGAAACTTTTACTTGGTTATTTAAGACATGGTTGGAATGTATGCATGGAAGTTCTCCAAATGCCATAATCACTGATCAAGACAGAGCAATGAAGAATGCAATTGAGATTGTCTTTCCGAAAGCTCGTCATCGGTGGTGCTTATGGCATTTAATGAAAAAGATTCCAGAAAAGTTTGGTAGTCACTCTGACTACGAGTCTATCAAAACACTTTTGCATGATATTGTATATGATTCTTTTACCAAAAGTGATTTTATGACGAGGTGGGAAAATATGATTGAGTGTTACAAACTACAGGATAACGAATGGTTGAAAGGGTTATTTGTTGAGCGACATCGTTGGGTCCCTGCATATGTAAGGGACACATTTTGGGCTGGAATGTCAACTACACAACGAAGTGAAAGTATGAACTCGTTTTTTGATGGATATGTAAGCTCAAAGACAACATTGAAGCAATTTGTTGAGCAATATGATAATGCATTGAAAGACAAAATTGAAAAGGAAAACATTGCTGACTTTCGTTCTTTTAATACAGTTATTTCTTGTATTAGTCACTTTGGCTTTGAGTTCCAATTCCAAAAAGCATTTACCAATGCAAAGTTTCAGGAATTCCAATTGGAAATAGCTTCTATGATGTACTGTCATGCATGTTTCAACAGATTGGAGGGTTTGGATTCAATATTTTATGTTACAGAAAGTAAGAAAGTATATGACACGATGAAAGATATTGTGTTGATGGTGTTCTTCAATGAAAAAGACTTTGTGTTAAAATGCACCTGCTGCTTGTTTGAATTTAAAGGCATTTTATGTAGGCACATCCTTTGCGTGCTTAAGCTCATAGGGAAAACAGATTTCGTGCCATCTAATTATATTTTGGCACGGTGGAGGAAGGATATAAAGCGGAGGTATACACTTATTAAATGTGGTTTTGATAATTTGGCTGGAAAAACTGAATTGCAACGCGTGGGTAAAGCTTGTGATGCCTTTTATGAGTTTGCTTCAACGAGGATAAATAGTGACGATGATTTAGTGAAAGTGATGAAATTGATTCAAAACATGAAAATTGAGTTACCATGTAATGAAACATCTCCTAGAATTGTAGAAGAAGATTGTTCAACTCAAAATCAAGCTACCATTCTTGATCCTAAACTAGCTCGAAGTAAAGGGCGTCCTCCTTCAAAAAGGAAGACTTCTATAGTTGATCAGATTGTAAAGAAGAAGCTTGCACAAAAGAAAACTAAAAAAAGAAACCAAAGTAGTAAAAATATTCAAGTTCAAGAAGAGGGCCAATGTACATCTAGAGGTCAAGAAATTGAAGACGAAGTGTTTTACATATCTCAACTTGGTGATAGAATTGGCACACAAGAGAGCATTCAAGGACTAAGATTGCATGTAGTTCAAAATACTACAAATGAAGAGTTTCTTAGGTATCAAATTTTTGATGGGACTGGGACACAAGACAATATTCAAGAGCATAACTATGTTTGTAGCAGTGAAAATGGTAGTGTGAATACTGTAGCTTCCTTCAATCCAAATCAAGAACATTTTGGTCAAGTAAACAAGGCTCCTTATTACTCTCGGGTCACAAAACCATAA 2457 0.3569 MQKGFESCDELETNDCLEANGTCEEETPCDGMSFGSEKEITEYYKNYAERVGFGVKKISSKKGDEGKMYFTLACSRARKYVSRPKNMLEPNPITQTQCKARLNACISLDGTTKIKSVFFEHNHDLSPGKARYFRSNKNIGAQMKRRLELNDQAGINVSRNFRSFVVEADGYENLTFGEKDCRNYIDKVRRLRLGTGDAEAIQNYFVRMQKQNSQFYYVMDVDDESRLQNVFWADARCRVAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSMLLGCALLSNEDTETFTWLFKTWLECMHGSSPNAIITDQDRAMKNAIEIVFPKARHRWCLWHLMKKIPEKFGSHSDYESIKTLLHDIVYDSFTKSDFMTRWENMIECYKLQDNEWLKGLFVERHRWVPAYVRDTFWAGMSTTQRSESMNSFFDGYVSSKTTLKQFVEQYDNALKDKIEKENIADFRSFNTVISCISHFGFEFQFQKAFTNAKFQEFQLEIASMMYCHACFNRLEGLDSIFYVTESKKVYDTMKDIVLMVFFNEKDFVLKCTCCLFEFKGILCRHILCVLKLIGKTDFVPSNYILARWRKDIKRRYTLIKCGFDNLAGKTELQRVGKACDAFYEFASTRINSDDDLVKVMKLIQNMKIELPCNETSPRIVEEDCSTQNQATILDPKLARSKGRPPSKRKTSIVDQIVKKKLAQKKTKKRNQSSKNIQVQEEGQCTSRGQEIEDEVFYISQLGDRIGTQESIQGLRLHVVQNTTNEEFLRYQIFDGTGTQDNIQEHNYVCSSENGSVNTVASFNPNQEHFGQVNKAPYYSRVTKP* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1381 818 Pfam MULE transposase domain 247 341 IPR018289 -
Mtr2g1381 818 Pfam FAR1 DNA-binding domain 42 126 IPR004330 -
Mtr2g1381 818 Pfam SWIM zinc finger 544 564 IPR007527 GO:0008270
Mtr2g1381 818 MobiDBLite consensus disorder prediction 696 719 - -
Mtr2g1381 818 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 627 IPR031052 GO:0006355
Mtr2g1381 818 PANTHER OS03G0843700 PROTEIN 15 627 - -
Mtr2g1381 818 SMART 26again6 543 570 IPR006564 GO:0008270
Mtr2g1381 818 ProSiteProfiles Zinc finger SWIM-type profile. 530 568 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1381 Mtr-Chr2 15106547 15110288 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g1381 MULE 5.2e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1381 - - cam:101506732 1021.15