LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g1379	ATGGTTAGAGGTAACCCTAGGTTCTTGGAATTAAGCTTGAAGAATCATCAAATTAAGTTTGAATTTTTTCTATCCAAAGGTGCTTCTTCATCTCATATTGTTTCATTGTTAACTACATACCCTCAAATTTTACAAACTAGCTTTGAGAATCGAATAATCCCTCTTTTTAAATTGCTAACAAGGTTCTTTAAAACTAACAAGGATACTATTGTTTGCTTAATTCAACATTCGAAATGGGTTACTAGTCATCCCCATCACCTTATTGTGGCTAGTATCAATCTGATTTCTGATTTTGGAGTTTCTGATTCTGTCATTGCTAGATTGCTTCAAAATAAGCCATCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGAGTTTAGGGTTTGATCCTTCAACAGCTTCTTTTGGGGTTGCTTTGGTAGCCAAGAAAGGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGACACCTTTAAGAAATGGGGTTGGTCTGATGAAAATATTGTTGAAGCATTTAGGAGTCAACCTAATTTAATGTTGGTTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGATTGGAATTCATTGGAACTTGCTAAATTTCCAAATATGTTTTGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTTTGGCAATTTCTTTTGATAAAAGGTTTGCGACAAAAGAATGCAAGCTTAGTTACACCATTTACATGTTCTGAGAATTCGTTCTTGAACAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTCTTAAAGCTGCATGAGGAAAAAATGAAATTTGCAAATACAAAGAACATTGGCATGCCATCCACCAAATGTGAACAAATATGGTGA	897	0.3356	MVRGNPRFLELSLKNHQIKFEFFLSKGASSSHIVSLLTTYPQILQTSFENRIIPLFKLLTRFFKTNKDTIVCLIQHSKWVTSHPHHLIVASINLISDFGVSDSVIARLLQNKPSIFGSKDLIKSLEEVKSLGFDPSTASFGVALVAKKGMSKKLWDEKVDTFKKWGWSDENIVEAFRSQPNLMLVSIDKINLVMSFWVNQLDWNSLELAKFPNMFCYSLHKRIIPRASVWQFLLIKGLRQKNASLVTPFTCSENSFLNKFVFSFKEESDYLLKLHEEKMKFANTKNIGMPSTKCEQIW*	299

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g1379	298	PANTHER	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	5	284	-	-
	Mtr2g1379	298	Pfam	mTERF	150	257	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	Pfam	mTERF	4	116	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	Gene3D	Transcription termination factor 3, mitochondrial	43	273	IPR038538	-
	Mtr2g1379	298	PANTHER	CGI-12 PROTEIN-RELATED	5	284	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	SMART	mt_12	34	65	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	SMART	mt_12	205	239	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	SMART	mt_12	1	29	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	SMART	mt_12	173	204	IPR003690	GO:0003690\|GO:0006355
	Mtr2g1379	298	SMART	mt_12	106	134	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g1379	Mtr-Chr2	15083114	15086862	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Mtr2g1379		mTERF	1.6e-11	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g1379	K15032		-	gmx:102667698	251.521