Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1379 ATGGTTAGAGGTAACCCTAGGTTCTTGGAATTAAGCTTGAAGAATCATCAAATTAAGTTTGAATTTTTTCTATCCAAAGGTGCTTCTTCATCTCATATTGTTTCATTGTTAACTACATACCCTCAAATTTTACAAACTAGCTTTGAGAATCGAATAATCCCTCTTTTTAAATTGCTAACAAGGTTCTTTAAAACTAACAAGGATACTATTGTTTGCTTAATTCAACATTCGAAATGGGTTACTAGTCATCCCCATCACCTTATTGTGGCTAGTATCAATCTGATTTCTGATTTTGGAGTTTCTGATTCTGTCATTGCTAGATTGCTTCAAAATAAGCCATCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGAGTTTAGGGTTTGATCCTTCAACAGCTTCTTTTGGGGTTGCTTTGGTAGCCAAGAAAGGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGACACCTTTAAGAAATGGGGTTGGTCTGATGAAAATATTGTTGAAGCATTTAGGAGTCAACCTAATTTAATGTTGGTTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGATTGGAATTCATTGGAACTTGCTAAATTTCCAAATATGTTTTGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTTTGGCAATTTCTTTTGATAAAAGGTTTGCGACAAAAGAATGCAAGCTTAGTTACACCATTTACATGTTCTGAGAATTCGTTCTTGAACAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTCTTAAAGCTGCATGAGGAAAAAATGAAATTTGCAAATACAAAGAACATTGGCATGCCATCCACCAAATGTGAACAAATATGGTGA 897 0.3356 MVRGNPRFLELSLKNHQIKFEFFLSKGASSSHIVSLLTTYPQILQTSFENRIIPLFKLLTRFFKTNKDTIVCLIQHSKWVTSHPHHLIVASINLISDFGVSDSVIARLLQNKPSIFGSKDLIKSLEEVKSLGFDPSTASFGVALVAKKGMSKKLWDEKVDTFKKWGWSDENIVEAFRSQPNLMLVSIDKINLVMSFWVNQLDWNSLELAKFPNMFCYSLHKRIIPRASVWQFLLIKGLRQKNASLVTPFTCSENSFLNKFVFSFKEESDYLLKLHEEKMKFANTKNIGMPSTKCEQIW* 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1379 298 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 5 284 - -
Mtr2g1379 298 Pfam mTERF 150 257 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 Pfam mTERF 4 116 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 Gene3D Transcription termination factor 3, mitochondrial 43 273 IPR038538 -
Mtr2g1379 298 PANTHER CGI-12 PROTEIN-RELATED 5 284 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 SMART mt_12 34 65 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 SMART mt_12 205 239 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 SMART mt_12 1 29 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 SMART mt_12 173 204 IPR003690 GO:0003690|GO:0006355
Mtr2g1379 298 SMART mt_12 106 134 IPR003690 GO:0003690|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr2g1379 Mtr-Chr2 15083114 15086862 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1379 mTERF 1.6e-11 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1379 K15032 - gmx:102667698 251.521