Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1378 ATGTCACTATCTGGTTATCTCCAACACAACAACACTCACATTGAACTCTCAAAATCACCCATGTCCAACAAATTGTTTTTCTCCCAGAATCTTGTTTTATGTCTCATCACAACTAAATCAACAACCTTAAAATTCAACAACCACTTCTCATTCCCACTTTCACTCAAATGCAGCAGCATCACAACATCTCAATCAGAATCAATCACACAACCTTTTGCTGTATCTTATCTTATCAACAATTTTGATTTCTCAACTGAATCAGCTCTCAAAGCTTTCAACCTCAGGCACGTTCGTTTCAATACCCCAGATAGGCCTGACTCAGTCATCAACTTCTTAAAAAGCTATGGCTTTTCAAACTCCAACATTCGCATCATCATCAAAAAAGCACCTTGGTTACTTTCATCACAACCCCACAAAATGTTATTGCCAAAGTTTCAATTCTTTCTATCTGATGCTTCTTATTCCTCTGATATTATTCCATTGTTAACTGCACACCCTAGAATTTTACAAGGTAGCTTGGAGAGACGAATAATCCCTTTTTTTGAATTATTAAGTAGGTACTTGAAAACCAACAAGGATATCATTGTTTGCTTAATTCGATATTGGACTGCATTTTCTACTAATCCCCATGACCGTATTGTGTCTAATATCAATTTGATGGTTGATTTTGGATTTTCTGATTCTACCATTGCTAGATTGCTTCGAACAAGGCCATCTATATTTGGTTCAAATGATATGATTAAGTTATTGGAGGAAATTAAGGGTTTAGGGTTTAAACCTTCAACGACCGCTTTTGGGACTGCTTTGATGACCAAGCAATTGTTGGGTAACATACTTTGGGATAAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGTATTTAGGAGTCAGCCTGGTTTGATGTTGACTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAAATGGGTTGGGATCCCTTGGCACTTACTAAAAATCCACTTATGTTTTCTTTTAGTTTACCTAAAAGGATCATTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAAAGAAGAAGGCGAGCTTAGTTAGACCATTTGCTTATTCCGACGATATCTTCTTGAACAAGTATGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTGTTGAAGCTATATAACGAAAAAATGAAACTTGCAAATGCAACGGAGAACAATGGGATGCCATCCACCAAATGTGTAATGCATTGA 1272 0.364 MSLSGYLQHNNTHIELSKSPMSNKLFFSQNLVLCLITTKSTTLKFNNHFSFPLSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLRHVRFNTPDRPDSVINFLKSYGFSNSNIRIIIKKAPWLLSSQPHKMLLPKFQFFLSDASYSSDIIPLLTAHPRILQGSLERRIIPFFELLSRYLKTNKDIIVCLIRYWTAFSTNPHDRIVSNINLMVDFGFSDSTIARLLRTRPSIFGSNDMIKLLEEIKGLGFKPSTTAFGTALMTKQLLGNILWDKKVDVFKKWGWSDEDVIRVFRSQPGLMLTSIDKINLVMSFWVNQMGWDPLALTKNPLMFSFSLPKRIIPRASVLQFLLMKGLRKKKASLVRPFAYSDDIFLNKYVFSFKEESDYLLKLYNEKMKLANATENNGMPSTKCVMH* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1378 423 Pfam mTERF 109 241 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 Pfam mTERF 282 381 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 330 364 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 196 226 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 123 155 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 159 191 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 298 329 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 SMART mt_12 231 259 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 41 409 - -
Mtr2g1378 423 PANTHER CGI-12 PROTEIN-RELATED 41 409 IPR003690 GO:0003690|GO:0006355
Mtr2g1378 423 Gene3D Transcription termination factor 3, mitochondrial 153 398 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1378 Mtr-Chr2 15078941 15080618 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1378 mTERF 6.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1378 K15032 - gmx:102663414 323.939