Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1377 ATGTCCAACAAATTGTTTTTCTCCCAGAATCTTGTTTTAGGTGTCATAACAACTAAATCAACAACCTTAAAATTCAACAACCACTTCTCATTCCCATTCTCACTCAAATGCAGCAGCATCACAACATCTCAATCAGAATCAATCACACAACCTTTTGCTGTATCTTATCTTATCAACAATTTTGATTTCTCAACTGAATCAGCTCTCAAAGCTTTCAACCTCAGGCAAGTTCGTTTCAATACCCCAGATAATCCTGACTCAGTCATCAACTTCTTTCAAAACCATGGTTTTTCACACTCTGACATACGCATCATCATCAAAAAAGCACCATGGTTACTTTCATCACAACCCCACAAAAGGTTTTTGAAAACCAACAAGGATACTATTGTTTACTTAATTCTAAATTCAAGGTCGTTTATAACTCCCCTTCACCTTCTAGAGGCTAATATCAATTTGATGGTTGATTTTGGAGTTTGTGATTCTGCCATTGCTAGATTGCTTCGAACTAGGAAATCTATATATTGTTCAAATGATTTGATTAAGTCATTGGAGGACGTTAAGGGTTTAGGGTTTGACCCTTCAACGGCCGCTTTTGGGACTGCTTTGGTGACCAAGCATTGTATGAGTAACATACTTTGGGATAAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGTATTTAGGTGTCAGCCTAGTTTGATGTTGGCTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAAATGGGTTGGGATCCCTTGGAACTTACTAAATCTCCACTTATGTTTGGTTATAGTTTACCAAAACGGATCATTCCAAGAGCCTCAGTTTTGCAATTTATTTTGATGAAAGGTTTGCGGAAAAAAAATGCGAGCTTAGGTAGACCATTTTCTTATTCTGAGAATATGTTCTTGAACAAGTGTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTGTTGAAGCTATATGACGAAAAAATGAAACTTGCAAATACAACGGAGAACAATGGGATGCCATCCACCAAATGTAGTCTATACTTCAATCCATGGACCATAGTCATCGAAGAGGGAGAGGATATGGAATCCGGCAGCAAGGGGAAAAATTTCTTGGGCAAAACAAGATAA 1155 0.3723 MSNKLFFSQNLVLGVITTKSTTLKFNNHFSFPFSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLRQVRFNTPDNPDSVINFFQNHGFSHSDIRIIIKKAPWLLSSQPHKRFLKTNKDTIVYLILNSRSFITPLHLLEANINLMVDFGVCDSAIARLLRTRKSIYCSNDLIKSLEDVKGLGFDPSTAAFGTALVTKHCMSNILWDKKVDVFKKWGWSDEDVIRVFRCQPSLMLASIDKINLVMSFWVNQMGWDPLELTKSPLMFGYSLPKRIIPRASVLQFILMKGLRKKNASLGRPFSYSENMFLNKCVFSFKEESDYLLKLYDEKMKLANTTENNGMPSTKCSLYFNPWTIVIEEGEDMESGSKGKNFLGKTR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1377 384 Pfam mTERF 214 314 IPR003690 GO:0003690|GO:0006355
Mtr2g1377 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 120 342 - -
Mtr2g1377 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 122 - -
Mtr2g1377 384 Gene3D Transcription termination factor 3, mitochondrial 58 331 IPR038538 -
Mtr2g1377 384 SMART mt_12 263 297 IPR003690 GO:0003690|GO:0006355
Mtr2g1377 384 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Mtr2g1377 384 PANTHER CGI-12 PROTEIN-RELATED 21 122 IPR003690 GO:0003690|GO:0006355
Mtr2g1377 384 PANTHER CGI-12 PROTEIN-RELATED 120 342 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1377 Mtr-Chr2 15072514 15075369 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1377 mTERF 2.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1377 K15032 - gmx:102663414 257.299