Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1376 ATGTTGAAGAAATTGTTTATCTCCCACAATGTTATTTTAGAAATCAACGCAACAAAATCAACAACCCCAAAAATTGATCATCTTTTTCAACACTTCTCATTCCCAATTTCACTCACAAGATTCAGCACCACAACATCAACATCAGAATCCAACACTCACCCATTCGCTGCATCCTACCTCATCGACAATTTTGGTTTCTCACCTCAATCTGCTCTTAAAGCTTTCAACAACAAACAGGTTCGTTTCAATACCCTTGAAAAGCCTAATTCAGTTCTCACCTTCTTTCAAAATCATGGCTTTTCACACGAAAACATACGCATCATCATTAGAAAAGAACCATGGTTACTTTCATCACAACCCCACAAAATGTTATTGCCAAAGTTTGAATATTTTCTATCCAAAGGTGCTTCTTCAGCTGATATTGTTTCATTGTTAACTGCAAACCCTACAATTTTACGAAGTAGCTTGGGCAAACGAATAATCCCTCTTTTTGAATTGTTAAGTAGGTTCTTTAAAACCAACAAGGATATCATTGTTTGCTTACTTCGACATTCAATGTCGTTTATTATTAGCCCATATCACCTTATTGTGGCTAATATCAATTTGATAACTGGTTTTGGAGTTTCTGATTCTACCATTGCTAAATTGCTTCAGAAAAGGCCATCTATATTTGGTTCAACTGATTTGATTAAGTCATTAGAGGAAGTTAAGCGTTTAGGGTTTCATCCTTCAACAACTACTTTTGGGACTGCTTTGACAGCCAAGAAAGGTTTAAGTAAAAAACTTTGGGATGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGCATTTAGGAGTTATCCTAATATTTTGTTGGCTTCCATTGAAAAGATTAATTTGTTGATGATTTTTTGGGTCAATCAATTGGGTTGGGATTCCTTGGAACTTACTAAATGTCCAATTATGTTTGGTTATAGTTTACATCAAAGGATCATTCCAAGGGCATCAGTTTTGCAATTTCTATTTATGAAAGGTTTGCGAGAAAAGAATGCAAGCTTAGTTGCACCATTTACTTATTCTGAGAAGCTGTTCTTGAACAAGTTTGTTTTCAGCTTTGAGGAGGAGTCTGATTATCTATTAAAGCTATATAATGAAAAACAGAAACTTGCAAATACAAAAGAGAACACTAGCATGCCTACCTCCAAATGTCCTTGGAGGATTTTATCTTTAAGGAGAAATTATTCAAGATTGATGTCGGAAAACCTTGAGCTAGTTGCAGACGAATCATGA 1290 0.3519 MLKKLFISHNVILEINATKSTTPKIDHLFQHFSFPISLTRFSTTTSTSESNTHPFAASYLIDNFGFSPQSALKAFNNKQVRFNTLEKPNSVLTFFQNHGFSHENIRIIIRKEPWLLSSQPHKMLLPKFEYFLSKGASSADIVSLLTANPTILRSSLGKRIIPLFELLSRFFKTNKDIIVCLLRHSMSFIISPYHLIVANINLITGFGVSDSTIAKLLQKRPSIFGSTDLIKSLEEVKRLGFHPSTTTFGTALTAKKGLSKKLWDEKVDAFKKWGWSDEDVIRAFRSYPNILLASIEKINLLMIFWVNQLGWDSLELTKCPIMFGYSLHQRIIPRASVLQFLFMKGLREKNASLVAPFTYSEKLFLNKFVFSFEEESDYLLKLYNEKQKLANTKENTSMPTSKCPWRILSLRRNYSRLMSENLELVADES* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1376 429 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 391 - -
Mtr2g1376 429 Pfam mTERF 198 364 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 Pfam mTERF 92 224 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 Gene3D Transcription termination factor 3, mitochondrial 158 381 IPR038538 -
Mtr2g1376 429 PANTHER CGI-12 PROTEIN-RELATED 13 391 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Mtr2g1376 429 SMART mt_12 214 242 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1376 Mtr-Chr2 15067062 15069974 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1376 mTERF 2.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1376 K15032 - gmx:102663414 326.25