Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1375 ATGTTGAAGAAATGGTTTCTCTCCCACAATGCTGTTTTAGGTATCATCACCACAAAATCAACAACCCCAAAATTCAACAACCCTCTTCTGCATCAATACTTCTCGTTCCCAATTTCACTCACAAGATTCTGCACCACAACAACACACCCATTCGCTGTATCATACCTTGTCAACAATTTTGGTTTCTCAACTGAATCAACTCTCAAAGCTTTCAACAACAAGCAGGTTTTCGAAACCAACAAGGATACCATTGTTGGCTTAATTCGATATTCAAGATCGTTTACTTTTTATCCCTATCACTTTCTAGAGGCTAATATCAATTTGATGGTGGATTTTGATGTTTCTGATTCTACCATTGCTAGATTGCTTCAAAAAAGGCCATCTATATTTGGTTCAAAGGATTTGATTATGTCATTGGAGGAAGTTAAGTGTTTAGGGTTTGACGCTTCAACGACCACTTTTGGGACTGCTTTGATGACCAAGCAATGTATGAGTAAAATACTTTGGGATAAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGTATTTAGGTGTCAGCCTAGTTTGATGTTGGCTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGGATTTCTTGGCACTTACTAAATGTCCACTTATGTTTGGATATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTCTGCAATTTCTTTTTATGAAAGGTTTGCGAGAAAAAAATGCGAGCTTAGTTTCACCGTTTACTTATTCTGAGAATTTATTCTTGAACAAGTGTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAACTTGCAAATACAAAAGAGAACATTGGCATGCCATCCACCAAATGTGTAATTTATTGA 939 0.361 MLKKWFLSHNAVLGIITTKSTTPKFNNPLLHQYFSFPISLTRFCTTTTHPFAVSYLVNNFGFSTESTLKAFNNKQVFETNKDTIVGLIRYSRSFTFYPYHFLEANINLMVDFDVSDSTIARLLQKRPSIFGSKDLIMSLEEVKCLGFDASTTTFGTALMTKQCMSKILWDKKVDVFKKWGWSDEDVIRVFRCQPSLMLASIDKINLVMSFWVNQLGWDFLALTKCPLMFGYSLHKRIIPRASVLQFLFMKGLREKNASLVSPFTYSENLFLNKCVFSFKEESDYLLKLYEEKMKLANTKENIGMPSTKCVIY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1375 312 SMART mt_12 120 148 IPR003690 GO:0003690|GO:0006355
Mtr2g1375 312 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Mtr2g1375 312 SMART mt_12 219 253 IPR003690 GO:0003690|GO:0006355
Mtr2g1375 312 Gene3D Transcription termination factor 3, mitochondrial 47 287 IPR038538 -
Mtr2g1375 312 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 75 298 - -
Mtr2g1375 312 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 12 76 - -
Mtr2g1375 312 PANTHER CGI-12 PROTEIN-RELATED 75 298 IPR003690 GO:0003690|GO:0006355
Mtr2g1375 312 PANTHER CGI-12 PROTEIN-RELATED 12 76 IPR003690 GO:0003690|GO:0006355
Mtr2g1375 312 Pfam mTERF 102 270 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1375 Mtr-Chr2 15062724 15064454 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1375 mTERF 3.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1375 K15032 - gmx:102667698 201.445