Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1368 ATGAAAGTATCAATACTTTTTCTCTTATGCTTCTTCTCTTGTGTTCTACTAGTCCTTTGTCATGATAATGATAAAACCACTTTGAATGTGCTTTTGGAGGTGAAATCATCTTTTACAGAAGACCCTGAAAATGTTCTTAGTACTTGGTCTGAAAACAACACAGATTACTGTACTTGGAGAGGTATTTCATGTGACTCGGTGAGTCGTGACATAGTTAGACTCGTTTTGTCTAACTCAAAACTCACTGGGTCAATTTCACCTTCTATCGGTCTTTTACAAAACCTAACTCACCTTGATCTTTCATCAAACCATATTGTGGGTCCCATTCCACCTTCTCTCTCCAAACTTACTAAACTAGAATCTTTGCTTTTGTTCTCCAACCAACTGACGAGTCAAATTCCCGCTGAGTTTGGCTCGTTAGTGAATCTCCGATTTTTGCGACTCGGTGATAATCAACTCAGTGGTGAAATTCCCTCTTCATTAGGCAATCTTGCTAAACTTGTCACCCTTGGGTTAGCTTCATGCAAACTCAACGGTTCGATCCCGAGTGAACTCGGTCGACTCACTGAGTTAAAGAATCTTATTATTCAAGACAACAAGTTAACCGGTTCTATTCCATCCGAGTTAGGCAACTGTTCAAGCCTCATCAACTTCACTGGAGCTGAAAACGAACTCAATGGAACAATCCCGAGTCAACTGAGTCGACTCAGAAACCTTGAAATTCTCAGTCTTGCAAAAAATACCTTAACAGGTGAGTTACCGAGTCAACTCGGTGAAATGAGTAAACTCGAATATCTCAATGTGATGGAAAACAAACTTGAGGGTCACATTCCAATTTCTCTATCTCAATTGGGTAATCTTGTAGATCTTGACTTGTCAACGAACAAATTCAGTGGAGAAATTCCAAGAGAGTTTACCAACATGTCTAGGTTACAATACTTAGTTCTTTCTGATAACCCTTTATATGGAAATATTCCAAAAACTTTATGTTACAAATCAAAAAGTTTAGAGCATTTAATAATATCTAGAAGTGGACTTCATGGTGAAATTCCATCCGAGTTGAGTCAATGTAAATCATTGAAGCAAATTGATTTATCAAACAATTATCTCAATGGAACAATACCTCTTGAGATTTATGGTTTGGTGAATTTAACTAATATTTTGCTTCATAACAATAGTTTGGTTGGTTCAATTTCACCTTTCATAGGAAATTTGAGTAACATGCATTTACTTGCATTGTATCATAACAAGTTGCATGGTGCTTTGCCTAAAGAGATTGGAAGGCTTGGAAAGTTGGAAATTTTGTATCTTTATGAAAATCAGTTTTCTGGGGAGATACCTATGGAGATTGGTAATTGTTCAGAATTGCAAATGGTTGATTTCTTTGGTAACCATTTTGGTGGAAGAATTCCAATCACTATTGGAAGGTTAAGGGAATTGAGTTTTCTTCATCTTAGGCAAAATGATCTTGTTGGTGAGATTCCAGCTACACTTGGGAATTGTCATAAACTAAGTGTGTTGGATTTGGCTGATAATAACCTCTCTGGTGGAATTCCCGCGACATTCGGGTACCTTAAAGATTTGAAGCAGTTCATGCTTTACAACAATTCTCTTGAAGGTGGTATTCCTCAGCAAATGGTGAATGTAGCAAATTTGACAAGAGTTAATCTTTCAAAGAATAGGCTGAATGGAAGTTTGGCTCCATTGTGTAGCTCCAGAGATTTTCTTTCTTTTGATGTCACAGGTAATGTGTTTGATGGTGAAATTCCTTCAAATTTGGGAAACTCTTTTTCTCTTAATAGGCTAAGACTAGGCGGTAACAAGTTTTCTGGTGAAATTCCGAGGACATTAGGAAAAATCACTGAATTATCTTTGTTAGATCTCTCAGGAAATTCACTCATAGGACCAATACCAGATGAACTATCTTTGTGTAACAAACTTGCCTCTATTGATTTAAGCAATAACCTACTTGTTGGTCAAGTACCAGCATGGCTTGGAAATTTGCCTAAGTTGGGAAAGGTTAATCTTGCATTCAATCAATTTTCTGGGCCTTTCCCGTTAGGCCTATTCAAATTACCTATGTTGTTAGTTCTTTCCTTGAATAACAATTCTCTTGATGGAAGTCTCCCGGATGGTTTAGACGAACTTGAATCGCTTAATGTCCTAAGACTTGACCAAAATAATTTTAGTGGACCAATCCCTCATGCAATAGGTAATTTGAGAAATCTATATGAGCTCAATCTATCTAGAAACGTCTTTAGTGGTGACATACCAGATGAAGTTGGGAGTCTTCAAAATCTCCAAGTTGCTTTAGACCTCAGTTACAATAATCTCTCTGGTCAGGTTCCATTTTCTGTTGGCACGTTGGCGAAATTGGAAGCACTTGATCTATCTCACAATCAACTCACTGGAGAAGTTCCTTCAAACATCGGTGAAATGATTAGCTTGGAAAAGCTGGATATCTCTTATAATAACTTTCAAGGTGCATTGAATAAGCGATTCTCCCGCTGGCCTTACGAGGCATTTGTAGGGAACCTTCATCTTTGTGGAGCCTCTCTTGGTAGCTGTGGTGCTTCCCGTAATAGGCTATCGAGGTTAAGTGAGAAATCAGTGATTATAATCTCTGCCTTGTCAACTCTAGCTGCAATTGCACTACTTGTTCTTGCAGTGAAAATCTTCTTGAGAAATAGGCAAGAACTTCTGAAGAAAGGCAGTGAATTAGAGTGTGTTTTCTCCTCCACTTCATCACAGGTGCAGAAACGGCCGTTGTTCCCTTTAAGTACAGGTGGACGGAGAGAATACAGGTGGCAAGAAATCATGGATGCTACAAACAATTTGAGTGATGAATTCATAATCGGTTCTGGAGGTTCTGGAACAGTCTACAGAGTTGAATTGCCTACCGGTGAGACTGTTGCTGTCAAGAAGATTTCATTGAAAGACGAATATCTGTTGCATAAAAGCTTTATAAGAGAAGTGAAGACTTTAGGGAGGATTAAGCATAGACATTTGGTGAAACTGGTTGGTTGTTGTAGCAATAGACACAAAGGAAATGGTTGCAATCTGTTGATATATGAGTTCATGGAGAATGGAAGTGTTTGGGATTGGTTACATGGAAATGCTCTCAAGTTAAGGAGAAGCCTTGATTGGGACACACGGTTCAAAATTGCTTTGGGGTTAGCTCAAGGAATGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCACCGGGATATCAAATCCAGCAATATATTGTTAGATTCCAATATGGATGCACACTTGGGAGATTTTGGATTGGCGAAAGCAATCGTTGAGAATCTTGATTCTAATACCGAGTCTACTTCTTGTTTCGCAGGATCTTATGGTTACATTGCTCCAGAATTTGGATACTCTTTGAAGGCAACAGAGAAAAGCGATGTATACAGCATGGGAGTCGTGCTTATGGAACTTGTTAGTGGTAAATTACCAACTGATGCAGCATTTAGAGGAAGTGTAGACATGGTGAGATGGGTGGAGATGCGCATTAACATGAAAGGAACTGAACGCGAGGAACTCGTAGATCCTGAGCTCAAACCTCTTTTACCTTATGAAGAGTTTGCAGCATTTCAAGTGCTTGAAATAGCTATACAGTGCACCAAAACTACACCAATGAAGAGGCCATCATCAAGGCAAGTATGTGATCTTCTTCTACATGTATCCAAGAACAAAAAAGTGGAGTTTGAGAAGATGAAGATGGATTCTTACAACTGA 3750 0.3869 MKVSILFLLCFFSCVLLVLCHDNDKTTLNVLLEVKSSFTEDPENVLSTWSENNTDYCTWRGISCDSVSRDIVRLVLSNSKLTGSISPSIGLLQNLTHLDLSSNHIVGPIPPSLSKLTKLESLLLFSNQLTSQIPAEFGSLVNLRFLRLGDNQLSGEIPSSLGNLAKLVTLGLASCKLNGSIPSELGRLTELKNLIIQDNKLTGSIPSELGNCSSLINFTGAENELNGTIPSQLSRLRNLEILSLAKNTLTGELPSQLGEMSKLEYLNVMENKLEGHIPISLSQLGNLVDLDLSTNKFSGEIPREFTNMSRLQYLVLSDNPLYGNIPKTLCYKSKSLEHLIISRSGLHGEIPSELSQCKSLKQIDLSNNYLNGTIPLEIYGLVNLTNILLHNNSLVGSISPFIGNLSNMHLLALYHNKLHGALPKEIGRLGKLEILYLYENQFSGEIPMEIGNCSELQMVDFFGNHFGGRIPITIGRLRELSFLHLRQNDLVGEIPATLGNCHKLSVLDLADNNLSGGIPATFGYLKDLKQFMLYNNSLEGGIPQQMVNVANLTRVNLSKNRLNGSLAPLCSSRDFLSFDVTGNVFDGEIPSNLGNSFSLNRLRLGGNKFSGEIPRTLGKITELSLLDLSGNSLIGPIPDELSLCNKLASIDLSNNLLVGQVPAWLGNLPKLGKVNLAFNQFSGPFPLGLFKLPMLLVLSLNNNSLDGSLPDGLDELESLNVLRLDQNNFSGPIPHAIGNLRNLYELNLSRNVFSGDIPDEVGSLQNLQVALDLSYNNLSGQVPFSVGTLAKLEALDLSHNQLTGEVPSNIGEMISLEKLDISYNNFQGALNKRFSRWPYEAFVGNLHLCGASLGSCGASRNRLSRLSEKSVIIISALSTLAAIALLVLAVKIFLRNRQELLKKGSELECVFSSTSSQVQKRPLFPLSTGGRREYRWQEIMDATNNLSDEFIIGSGGSGTVYRVELPTGETVAVKKISLKDEYLLHKSFIREVKTLGRIKHRHLVKLVGCCSNRHKGNGCNLLIYEFMENGSVWDWLHGNALKLRRSLDWDTRFKIALGLAQGMEYLHHDCVPKIIHRDIKSSNILLDSNMDAHLGDFGLAKAIVENLDSNTESTSCFAGSYGYIAPEFGYSLKATEKSDVYSMGVVLMELVSGKLPTDAAFRGSVDMVRWVEMRINMKGTEREELVDPELKPLLPYEEFAAFQVLEIAIQCTKTTPMKRPSSRQVCDLLLHVSKNKKVEFEKMKMDSYN* 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1368 1249 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Mtr2g1368 1249 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 569 864 IPR032675 -
Mtr2g1368 1249 SMART LRR_sd22_2 236 268 - -
Mtr2g1368 1249 SMART LRR_sd22_2 188 220 - -
Mtr2g1368 1249 SMART LRR_sd22_2 92 124 - -
Mtr2g1368 1249 SMART LRR_sd22_2 789 812 - -
Mtr2g1368 1249 SMART LRR_sd22_2 140 166 - -
Mtr2g1368 1249 Gene3D Phosphorylase Kinase; domain 1 910 1026 - -
Mtr2g1368 1249 Pfam Protein kinase domain 951 1226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1368 1249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1074 1086 IPR008271 GO:0004672|GO:0006468
Mtr2g1368 1249 Gene3D Transferase(Phosphotransferase) domain 1 1027 1248 - -
Mtr2g1368 1249 ProSiteProfiles Protein kinase domain profile. 946 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1368 1249 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 1246 - -
Mtr2g1368 1249 SUPERFAMILY L domain-like 30 326 - -
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 25 176 IPR032675 -
Mtr2g1368 1249 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 1246 - -
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 471 568 IPR032675 -
Mtr2g1368 1249 SUPERFAMILY Protein kinase-like (PK-like) 922 1229 IPR011009 -
Mtr2g1368 1249 PRINTS Leucine-rich repeat signature 360 373 - -
Mtr2g1368 1249 PRINTS Leucine-rich repeat signature 789 802 - -
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 375 470 IPR032675 -
Mtr2g1368 1249 ProSiteProfiles Leucine-rich repeat profile. 94 117 IPR001611 GO:0005515
Mtr2g1368 1249 SMART LRR_typ_2 284 307 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 429 453 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 477 501 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 740 764 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 308 332 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 116 139 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 188 212 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 236 260 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 620 644 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 92 115 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 140 164 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 692 716 IPR003591 -
Mtr2g1368 1249 SMART LRR_typ_2 789 813 IPR003591 -
Mtr2g1368 1249 SUPERFAMILY L domain-like 262 519 - -
Mtr2g1368 1249 ProSitePatterns Protein kinases ATP-binding region signature. 952 975 IPR017441 GO:0005524
Mtr2g1368 1249 SUPERFAMILY L domain-like 570 839 - -
Mtr2g1368 1249 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Mtr2g1368 1249 Pfam Leucine rich repeat 262 321 IPR001611 GO:0005515
Mtr2g1368 1249 Pfam Leucine rich repeat 741 802 IPR001611 GO:0005515
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 177 278 IPR032675 -
Mtr2g1368 1249 Gene3D Ribonuclease Inhibitor 279 374 IPR032675 -
Mtr2g1368 1249 SMART serkin_6 946 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1368 Mtr-Chr2 14926754 14931404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1368 561 830 Receptor kinase-like Gene Family AT1G73080 32.450 1.25e-31 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr2g1368 Pkinase 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1368 - - mtr:MTR_2g437730 2073.51