Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1364 ATGTCGAAAGCTTTTCTCTGCAACAATGCATTTCGCATATCAACAACAACAACACTCTACAACGCACCCTTCCTATTTTCACTCAAATTCCTCACCACCACTTCAAACCCATTCACCGTATCCTACCTCATCGACAAATTCGGATTCTCTCATGAATTCGCACTCAAAGCTTCCAAAGAGCTTTATTTCAAAACCTCACAAAAACCAGATTCAGTTCTCAACTTCTTCAAAAATCATGGTTTCAATGACTTAGACATACGCAGAATCGTCAAAATCGAACCATGGCTTCTTTCCTGCAATACCCACTTAACGATCCTCCCAAAGTTTCAGTTTTTAATCTCCAAAGGTGCTTCTTCCTCTGACATTGTTCGTATGGTTGTAGGTAACCCTAAGTTCTTGCAATTCAGCTTGAAGACTCATGAAATTAAGTTTGAATATTTTCTATCCAAAGGTGCTTCTTCCTCTCATATTATTTCATTGTTAACTTCAAACCCTCAAATTTTACAATATAGCTTAGACAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTGAAATCCAGCAAGGATACCATTCTCTGCTTAATTCGATGTTCCACTGCATTTACTATAAATCCCTATCGCATTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTCTGATAATGTCATTGCTAGTATGCTTCAGTCATGGCCATCTGTATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGTGTTTAGGGTTTGATCCTTCAAAGAATAGTTTTGGAATTGCTTTAGCAGCAAAGAAAGGTTTGAGTAAAAAACTTTGGGATGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGTATTTAGGATTCAACCTATTTTAATGTTTGTTTCAATTTATAAGATTGATTTGTTAATGAGTTTTTGGGTCAATCGATTGGGTTGGAATTCCTTGGCACTTACCAAGCGGCCACATATGTTTTCTTATAGTTTGGAGAAAAGGATCATCCCAAGGGCCTCAGTTATGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCGAGCTTAGTTACACCATTTGCTTATTCTGAGAATATGTTCTTGAGCAAGTTTGTTTTCAGATTTATGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAACTTGCATACACAAAGGAGAACAATGGCATGCCATTCACTTAA 1254 0.3596 MSKAFLCNNAFRISTTTTLYNAPFLFSLKFLTTTSNPFTVSYLIDKFGFSHEFALKASKELYFKTSQKPDSVLNFFKNHGFNDLDIRRIVKIEPWLLSCNTHLTILPKFQFLISKGASSSDIVRMVVGNPKFLQFSLKTHEIKFEYFLSKGASSSHIISLLTSNPQILQYSLDKRIIPLFELLSRFLKSSKDTILCLIRCSTAFTINPYRIIVANINLMTDFGVSDNVIASMLQSWPSVFGSKDLIKSLEEVKCLGFDPSKNSFGIALAAKKGLSKKLWDEKVDAFKKWGWSDEDVIRVFRIQPILMFVSIYKIDLLMSFWVNRLGWNSLALTKRPHMFSYSLEKRIIPRASVMQFLLMKGLRKKNASLVTPFAYSENMFLSKFVFRFMEESDYLLKLYEEKMKLAYTKENNGMPFT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1364 417 SMART mt_12 123 153 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 230 258 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 16 50 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 SMART mt_12 329 363 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 Pfam mTERF 73 380 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 PANTHER CGI-12 PROTEIN-RELATED 19 140 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 PANTHER CGI-12 PROTEIN-RELATED 143 408 IPR003690 GO:0003690|GO:0006355
Mtr2g1364 417 Gene3D Transcription termination factor 3, mitochondrial 144 397 IPR038538 -
Mtr2g1364 417 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 143 408 - -
Mtr2g1364 417 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1364 Mtr-Chr2 14888819 14891825 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1364 mTERF 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1364 K15032 - gmx:102666739 300.827