Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1342 ATGTTCAAAACATTTCTCAACCGCAATGCTTTCGCCATATCAAAAACCTCAACAGCACTCCAATATTCTCTCAGATTCCTCACCACTGCCATCACTTCCGATTCAAATTCATTCGCTGTATCCTACCTCATCCACAAATTCGGTTTCACACCTGAATCCGCACTCAAAGCTTCCAAACAGCTTTATTTCAAAACATCACAAAAACCTGATTCAGTTATCAACTTCTTCAAAAATCACGGTTTCAATGACTCAGATATACAAAACATCATCAAAAGAGAACCATGGCTTCTTTCCTGCGATACCCACAAAAGAATTCTCCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTACCTCTGACATTCTTCGTATTGTTGTAGGTAACCCTAGATTCATGAAATCAAGTTTGAAGAATCGTGTTATCCCTAATTATAATTTGATTACTCAATTCCTTAAATCTAATCAAAAAGCTATGTCTTCTGTAATTTTATGTCCTTCTTTGATTTGTTGTAATTATATGATTTCTAATATCAATTTGATGATTGATAATGGTGTTTGCAATACCAGCATTTATAGAATTCTCAGTACTAGACCTAATGCTATCTTTCGTGTTCCTAGAAAGGTAGGCGAGACTATGAATGAATTGAAAAATATGGGATTTGATCCTACTAGATATAACTTTGGTGATGCATTGCTTGCTAGATTATGTTTAAGCAAATCCACGTGGAATGATAGAATTGATACATTTAAGAAATGGGGTTGGTCGGAGGAAACTGTTATGGAAGCTATTAGGAAGCAGCCCAAATGTATGTTGGTATCCGACGAAAAAATCAATAGGGTGCTGAGTTTTTGGGTTAATGAGTTAGGTTGGGATTCTTCTTACCTTGCTAAGGGACCAGGGATGTTTTGTTATTGTTTGGAGAAAAGGATCATTCCAAGAGCTATGGTTGTCTTTTATCTTCTAACCAAGGGTTTGAGAAGCGAGTTTGCTAGCTTGACAGGTCCATTTTATGCGTCTGAGAAATTTTTTATGGAAAGGTATGTGTTATTTTATGAAGAGGATGCTTCTCATCTGTTGAAGTTATATCATCAAATGATGAAGATGGCAGATAAGAAGGTACAGCAAAATCATAAGTCATGGCAAATCCCGTTTGTAAAACGTTTGATTGTAGAAAAGTAG 1182 0.3596 MFKTFLNRNAFAISKTSTALQYSLRFLTTAITSDSNSFAVSYLIHKFGFTPESALKASKQLYFKTSQKPDSVINFFKNHGFNDSDIQNIIKREPWLLSCDTHKRILPKFQFLLSKGASTSDILRIVVGNPRFMKSSLKNRVIPNYNLITQFLKSNQKAMSSVILCPSLICCNYMISNINLMIDNGVCNTSIYRILSTRPNAIFRVPRKVGETMNELKNMGFDPTRYNFGDALLARLCLSKSTWNDRIDTFKKWGWSEETVMEAIRKQPKCMLVSDEKINRVLSFWVNELGWDSSYLAKGPGMFCYCLEKRIIPRAMVVFYLLTKGLRSEFASLTGPFYASEKFFMERYVLFYEEDASHLLKLYHQMMKMADKKVQQNHKSWQIPFVKRLIVEK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1342 393 Gene3D Transcription termination factor 3, mitochondrial 162 363 IPR038538 -
Mtr2g1342 393 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 PANTHER CGI-12 PROTEIN-RELATED 16 372 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 372 - -
Mtr2g1342 393 Pfam mTERF 177 329 IPR003690 GO:0003690|GO:0006355
Mtr2g1342 393 Pfam mTERF 73 222 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1342 Mtr-Chr2 14581117 14583067 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1342 mTERF 2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1342 K15032 - gmx:102663414 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1342 2 14581117 14583067 Mtr2g1342 2 14581117 14583067 ECH