Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1341 ATGTTCAAGCCGTTTCTCTTCCGCAATGCTTTTGGCCTATCAACAACACCACTCTACCAAATTTCTATCAGATTCTTCAACACTGCCCCTTCACAATCATTCACTGTTTCCTACCTCATCCACAAGTTTGGGTTCTCACATGAATTTGCACTCAAAGCTTCCAAACCGCTTTATTTCAAAACCTCACTAAAACCTGATTCAGTTCTTAACTTCTTCAAAAATTATGGTTTCAATGACTCAGACATACACAACATCATCAAAAGAGAACCATGGCTTCTTTCCTGCGATACCCACAAAACGATTCTACCAAAGTTTCAATTTTTACTCGCCAAAGGTGCTTCTCAATCTGACATTGTTCGTATGGTTGTAGTTAACCCTAAATTCGTGAAATCAAGCTTGAAGAATCATGAAATTATGTTTCACTTTTTTCTATCCAAAGGTGCTTCTTCCTCTGAGATTGTTTCATTGTTAACTTCAAACCCTATAATTTTGCATATTAGTTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAGTAAGTTCTTGAAAACCAACAAAGATATCATTATTTGCTTAATTCGGCATTCAACTGCATTTTCTATGAATTCCTATCACCTTATTATGGATAATGTCAATTTGATGTCTGATTTTGGAGTTTCTGATAATGTCATTGCTAGTTTGCTTCAGTCAAGGCCATCTATAGTTGGTTCAAAGGAATTGATTAAGTCATTGGAGGAAGTTAAGAGTTTAGGGTTTGATCCTTCAACAGCTTCTTTTGGGGTTGCTTTGGCAGCCAAGAAATGTATGAGAAAAAAACGTTGGGATGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTATTCAAGCATTTCGGTTGCAGCCTAATTTAATGTTGGTTTCAATTCATAAGATTGATTCGTTAATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCATTGGCACTTACCAAACTACCAAATGTGTTTTGTTTAAGTTTGGAGAAAAGGATTATTCCAAGGGCATTGGTTGTGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAGGTACACCATTTGCTTATTCTGAGAAAATGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAAGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAGGCAAACTTGCAAACACAAAGGAGAACAATGGCATGCTGTCCACCAAATGTGTAATTTAG 1254 0.3589 MFKPFLFRNAFGLSTTPLYQISIRFFNTAPSQSFTVSYLIHKFGFSHEFALKASKPLYFKTSLKPDSVLNFFKNYGFNDSDIHNIIKREPWLLSCDTHKTILPKFQFLLAKGASQSDIVRMVVVNPKFVKSSLKNHEIMFHFFLSKGASSSEIVSLLTSNPIILHISLEKRIIPLFELLSKFLKTNKDIIICLIRHSTAFSMNSYHLIMDNVNLMSDFGVSDNVIASLLQSRPSIVGSKELIKSLEEVKSLGFDPSTASFGVALAAKKCMRKKRWDEKVDAFKKWGWSDEAVIQAFRLQPNLMLVSIHKIDSLMSFWVNQLGWNSLALTKLPNVFCLSLEKRIIPRALVVQFLLMKGLRKKNASLGTPFAYSEKMFLSKFVFSFKEESDYLLKLYEEKGKLANTKENNGMLSTKCVI* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1341 417 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 140 403 - -
Mtr2g1341 417 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 136 - -
Mtr2g1341 417 Gene3D Transcription termination factor 3, mitochondrial 134 393 IPR038538 -
Mtr2g1341 417 PANTHER CGI-12 PROTEIN-RELATED 140 403 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 PANTHER CGI-12 PROTEIN-RELATED 19 136 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 119 149 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 83 114 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 226 254 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 SMART mt_12 325 359 IPR003690 GO:0003690|GO:0006355
Mtr2g1341 417 Pfam mTERF 69 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1341 Mtr-Chr2 14573230 14574927 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1341 mTERF 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1341 K15032 - gmx:102667698 327.791