Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1340 ATGTTCAAAGTTTTTCTCTTCCGCAATGCCTTTGCCATATCAACAACCTCATTTTCTATCAGATTCCTCACCACTACTATCACTTCAGATTCAAACTCATTCACCGTATCCTACCTCATCCACAAATTTGGATTCTCACATGAATTCGCACTCAAAGCTTCCAAACAGCTTTATTTCAAAACCTCACAAAAACCTGATTCAGTTCTCAACTTCTTCAAAAATCACGGTTTCACCGACTCACATATACGCAATGTCATCAAAAGGGAACCATGGCTTCTTTCCTGCGATACCCAGAAAAGGATTCTCCCAAAGTTTCAATTTTTACTCTCCATAGGTGCTTCTTCCTCTGACATTGTCCACATGGTTAGATGTAACCCTAAGTTCTTGGAATTAAGCTTGAAGAATAATCAAATTAAGTTTGAATATTTTCTATCCAAAGGTGCTTCTTCATCTCATATTATTTCATTGTTAACTTCAAACCCTCAAATTTTACAAAGTAGCCTGGACAAACGAATAATCCCTCTTTTTGAATTGTTAAGAATGTTCTTTAAAACTAACAAGGATACAATTGTTTGCTTAATTCGACATTCGAAATGGGTTGCTAGTTATCCCCATCACCTTATTGTGGCTAATATTAATCTGATGTCTGATTTTGGCGTGTCTCATTCTGTCATTGCTAGATTGCTTCAAATTAAACCATCTATATTTTGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAAGGTTTAGGGTTTCATCCCCCAATCACTACTTTTGGGGCTGCTTTGATAGCCAAGAAAGGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGCATTTAGAGGTCGTCCTGACTTGTTGTTGACTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGGATTCCTTGGCACTTGCTAAAAGGCCACATATTTTTAGTTATAGTTTGGAGAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATATCTTGTGATGAAAGGTTTGAGGAAAAAGAATGCAAGCTTAGTTGCACCATTTGATTATTCTGGGAAAATGTTCTTGAGCAAGTTTGTTTTTAGCTTTAAGGAAGAGTCTGATTATCTATTAAAGCTGTATGAAGAAATGAAACACGCATACACAATGGAAAACAATGGCATGCCATTCACAAATTAG 1242 0.3615 MFKVFLFRNAFAISTTSFSIRFLTTTITSDSNSFTVSYLIHKFGFSHEFALKASKQLYFKTSQKPDSVLNFFKNHGFTDSHIRNVIKREPWLLSCDTQKRILPKFQFLLSIGASSSDIVHMVRCNPKFLELSLKNNQIKFEYFLSKGASSSHIISLLTSNPQILQSSLDKRIIPLFELLRMFFKTNKDTIVCLIRHSKWVASYPHHLIVANINLMSDFGVSHSVIARLLQIKPSIFCSKDLIKSLEEVKGLGFHPPITTFGAALIAKKGMSKKLWDEKVDVFKKWGWSDEDVIRAFRGRPDLLLTSIDKINLVMSFWVNQLGWDSLALAKRPHIFSYSLEKRIIPRASVLQYLVMKGLRKKNASLVAPFDYSGKMFLSKFVFSFKEESDYLLKLYEEMKHAYTMENNGMPFTN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1340 413 SMART mt_12 154 186 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 SMART mt_12 83 114 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 SMART mt_12 226 254 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 SMART mt_12 119 149 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 SMART mt_12 325 359 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 Pfam mTERF 69 136 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 Pfam mTERF 135 305 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 Pfam mTERF 270 376 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 PANTHER CGI-12 PROTEIN-RELATED 14 138 IPR003690 GO:0003690|GO:0006355
Mtr2g1340 413 Gene3D Transcription termination factor 3, mitochondrial 140 393 IPR038538 -
Mtr2g1340 413 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 139 402 - -
Mtr2g1340 413 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 138 - -
Mtr2g1340 413 PANTHER CGI-12 PROTEIN-RELATED 139 402 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1340 Mtr-Chr2 14558206 14562736 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1340 mTERF 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1340 K15032 - gmx:102663414 323.168