Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1339 ATGTTGAAGAAATTGTTTCTTTCCCAGAATGTTGCTTTAGGCATCATCACCACAAAATCAACAACCCCAAAATTCAATAACTCTCTTCTGCACCAATACTTCTCGTTCCCAATTTCACTCACAAGATTCTGCACCACAACAACACACCCATTCGCTGTATCATACCTTATCAACAATTTCGGTTTCTCACCTCTATCTGCTCTCAAGGCTTTCAACAACAATCAGGTTCTTTTCAAATCCGCAGAAAATCCTAATTCAGTTATCAATTTCTTCAAAAATCGTGATTTTTCACACTCTGATATACGAATCATCATTAGAAAAGCACCATGGTTACTTTCATTACAACCCCACAATATAATTTTGCCCAAGTTTGAATTTTTTCTATCCAAAGGTGCTACTTCATCTGATATTGTTTCATTCATAACAGAAAACCCTCGAATTTTGCGAAGTAGCTTGGAGAAACGAATTATCCCTCTTTTTCAATTGTTAAGTAGCTTCTTGAAAACCAACAAGGATGTCATTCTTTGCTTACTTCGACATTCGACTTATGTTACTTTTAATTCCTATCACCTTGTTGCCGCTAATATCAATTTGATGACTGATTTTGGAGTTTCTGATTCTGTCATTGCTAGCTTGCTTCAAAAAAGGCCATCTATATTTGGTTCGACTGATTTGATTAAGTCATTGGAGGAAGTTAAGTGTTTAGGGTTTGATCCTTCAACGGCTACTTTTGGGGCTGCTTTGTTCGCCAAGAAATGTATGAGTAAAACACGATGGGATGAGAAAGTCGCCGTCTTTAAGAAATGGGGTTGGTCTGATGAAACTTTTTTTCAAGCATTTAGGTTGCATCCTAGTTTGATGTTGACTTCAATTGAAAAGATTAATTTTGTGATGCATTTTTGGGTCAACCAATTGGGTTGGGATTCCTTGGAACTTACTAAATGTCCACATATGTTTGGTTATAGTTTACATCAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCAAGATAAGAATGAAAGCTTAGTTACACCATTTACTTATTCCGAGAAATTCTTCTTGAGCAAGTTTGTCTTCAAGGAGGAGTGTGATTATCTATTAAAGCTATATGTGGAAAAAATGAAACCTGCATACACAAAGGAGAACAATGGCATGCCATTCACTAATTAG 1191 0.3619 MLKKLFLSQNVALGIITTKSTTPKFNNSLLHQYFSFPISLTRFCTTTTHPFAVSYLINNFGFSPLSALKAFNNNQVLFKSAENPNSVINFFKNRDFSHSDIRIIIRKAPWLLSLQPHNIILPKFEFFLSKGATSSDIVSFITENPRILRSSLEKRIIPLFQLLSSFLKTNKDVILCLLRHSTYVTFNSYHLVAANINLMTDFGVSDSVIASLLQKRPSIFGSTDLIKSLEEVKCLGFDPSTATFGAALFAKKCMSKTRWDEKVAVFKKWGWSDETFFQAFRLHPSLMLTSIEKINFVMHFWVNQLGWDSLELTKCPHMFGYSLHQRIIPRASVLQFLLMKGLQDKNESLVTPFTYSEKFFLSKFVFKEECDYLLKLYVEKMKPAYTKENNGMPFTN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1339 396 PANTHER CGI-12 PROTEIN-RELATED 13 386 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 Gene3D Transcription termination factor 3, mitochondrial 150 374 IPR038538 -
Mtr2g1339 396 Pfam mTERF 255 360 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 Pfam mTERF 88 272 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 386 - -
Mtr2g1339 396 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 SMART mt_12 210 238 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Mtr2g1339 396 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1339 Mtr-Chr2 14553042 14556050 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1339 mTERF 9.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1339 K15032 - gmx:102663414 327.02