Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1338 ATGTTGAACAAATGGTTTCTCTCCCAGAATGTTGTTTTAGGTCTCAACACAACAAAAACAACAACCTCAAAATTCAACAACCCTCTTTTCAACCAACACTTCTCGTTCCTAATTTCACTCACAAGATTCTGCACCACAACATCTCAATCTGAATCAGTCACACATCCATTCGCTGCATCTTATCTCATCAACAATTTTGGGTTCTCACATGAATCTGCTCTCAAAGCTTTCAACCTCAAGCAAGTTCGTTTCAATACCGCAGATAAACCTGATTCAGTCATCACCTTCTTTCAAAATCATGGCTTTTCACACGACAACATACGCATCATGATCAGAAGAGCACCATGGTTACTTTCATCACAACCCCACAAAAGGTTTTTGCCAAAGTTTCAATTTTTTCTATCCAATGCTGCTTCTTCCTCTGATATTGTTCCATTGTTAACTACAAACCCTAGAATTTTACGAAGTAGCTTGGACTTGGAGAAACAAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTGAAAACCAACAAGGATATCATTCTTTGCTTAATTCGATATTGGACTGCATTTGCTACTAATCCCTATCACCTTATTGTGTCTAATATCAATTTGATGTCTGATTTTGGAGTTTCTGATAATGTTATTGGTAGTTTGCTTCAGTCAAGGCCGTCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGATTTAGGGTTTCATCCTTCAATGACTAATTTTGGGACTGCTTTGATGGCCAAGAAATGTATGAGTAAAAAACTTTGGGATGAGAAAATTGATACCTTTAAGAAATGGGGTTGGTCTGATGAGGCTATTATTCGAGCATTTAGATGTCGTCCTGAATTGTTGTTGGCTTCAATTGATAAGATTAATTTGGTGATGAGTTTCTGGGTCAACCAATTGGGTTGGAATTCCTTGGCACTTACTAAAAGGCCACATATTTTTAGTTACAGTTTGGATAAAACGATCACTCCAAGGGCCTCAGTTTTGCAATTTCTTTTAATGAAAGGTTTGCGAGAAAAGAATGCAAGCTTAGTTGCACCATTTGGTTATTCTGGGAAAATGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGTTATATGAGGAAAAAGTGAAACTTGCATACACAAAAGAGAACAATGGCATGCCAATGCCATCTACCGAATGTGTAACTTGTTAA 1239 0.3656 MLNKWFLSQNVVLGLNTTKTTTSKFNNPLFNQHFSFLISLTRFCTTTSQSESVTHPFAASYLINNFGFSHESALKAFNLKQVRFNTADKPDSVITFFQNHGFSHDNIRIMIRRAPWLLSSQPHKRFLPKFQFFLSNAASSSDIVPLLTTNPRILRSSLDLEKQIIPLFELLSRFLKTNKDIILCLIRYWTAFATNPYHLIVSNINLMSDFGVSDNVIGSLLQSRPSIFGSKDLIKSLEEVKDLGFHPSMTNFGTALMAKKCMSKKLWDEKIDTFKKWGWSDEAIIRAFRCRPELLLASIDKINLVMSFWVNQLGWNSLALTKRPHIFSYSLDKTITPRASVLQFLLMKGLREKNASLVAPFGYSGKMFLSKFVFSFKEESDYLLKLYEEKVKLAYTKENNGMPMPSTECVTC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1338 412 Gene3D Transcription termination factor 3, mitochondrial 158 385 IPR038538 -
Mtr2g1338 412 Gene3D Transcription termination factor 3, mitochondrial 62 157 IPR038538 -
Mtr2g1338 412 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 396 - -
Mtr2g1338 412 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 SMART mt_12 144 177 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 SMART mt_12 218 246 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 Pfam mTERF 95 228 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 Pfam mTERF 263 363 IPR003690 GO:0003690|GO:0006355
Mtr2g1338 412 PANTHER CGI-12 PROTEIN-RELATED 14 396 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1338 Mtr-Chr2 14548889 14551606 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1338 mTERF 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1338 K15032 - gmx:102663414 335.109