Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1337 ATGTCTCATCTCATTCTCACTACATTCCGAACCATGTTGAAGAAATGGTTTCTTTCCAACAATGCTGTTTTATGTTTCATCACAACAAAATCAACAACCCCAAAATTCAACAACCCTCTTTTGCACCAATTCCCAATTTCACCCAGACGTTTCTGCACCATAACAGCCACTTCAGAATCAAACACACATCCATTCTCTGTATCATACCTCATCAACAATTTTGGATTCTCACATGAATCTGCTCTCAAAGCTTTCAACAACAAGCAGGTTCGTTTCAATACCCCAGATAATGCTGATTCTGTTATCACCTTCTTTCAAAACCATGGTTTTCCAAACTCCAACATACGCATCATCATCCAAAAGGCACCTTGGTTACTTTCATCACAACCCCACAAAAGGTTATTGCCAAAGTTTCAATTTTTTCTATCCAATGGTGCTTCTTTATCTGATATTGTTCCATTGTTAACTACAAACCCTCGAATTTTACGAAGTAGCTTGGAGAAACAAATAATCCCTCTTTTTCAATTATTAAGTAGGTGCTTAAAAACCAACAGGGATGCCATTATTTGCTTAATAAAACATTGGACTACATTTACTATTTATTATCACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAATTCCTCATTCTGTCATTGCTAGATTGATTCGATCTAGACCATTTTTAATTTGTTCAAAGGATTTGATTAATTCATTGGAGGAAATTAAGGGTTTAGGGTTTGATCCTTCAACGACTACTTTTGGGTATGCTTTGTTAGCCAATAACTGTACGAGTAAAAAACTTTGGGATGAGAAAGTTGATGTCTTGAAGAAATGGGGTTGGTCTGATGAAGATGTTATCCGGGCATTTAGGTGTCATCCTGATATGATGTTGACTTCAATTGAAAAGATTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGGATTCATTGGCACTTACCAAACGGCCACATATTTTAACTCATAGTTTGGAGAAATGGATTGTTCCAAGGGGATTGGTTGTGCAATTTCTTTTGATGAAAGGCTTGCGAAAAAAGAATGCCAGCTTAGTTACACCATTTAGATATTCTGAAAAATTGTTTTTGGAGAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGATATATGAGGAAAAAATAAAACTTGCATATACAATGGAAAACAATGGCATGCCATTCCCTAATTAG 1236 0.3552 MSHLILTTFRTMLKKWFLSNNAVLCFITTKSTTPKFNNPLLHQFPISPRRFCTITATSESNTHPFSVSYLINNFGFSHESALKAFNNKQVRFNTPDNADSVITFFQNHGFPNSNIRIIIQKAPWLLSSQPHKRLLPKFQFFLSNGASLSDIVPLLTTNPRILRSSLEKQIIPLFQLLSRCLKTNRDAIICLIKHWTTFTIYYHLIVANINLMTDFGIPHSVIARLIRSRPFLICSKDLINSLEEIKGLGFDPSTTTFGYALLANNCTSKKLWDEKVDVLKKWGWSDEDVIRAFRCHPDMMLTSIEKINLVMSFWVNQLGWDSLALTKRPHILTHSLEKWIVPRGLVVQFLLMKGLRKKNASLVTPFRYSEKLFLEKFVFSFKEESDYLLKIYEEKIKLAYTMENNGMPFPN* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1337 411 SMART mt_12 322 356 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 SMART mt_12 223 251 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 Pfam mTERF 268 373 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 Pfam mTERF 103 231 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 Gene3D Transcription termination factor 3, mitochondrial 69 199 IPR038538 -
Mtr2g1337 411 Gene3D Transcription termination factor 3, mitochondrial 200 390 IPR038538 -
Mtr2g1337 411 PANTHER CGI-12 PROTEIN-RELATED 23 401 IPR003690 GO:0003690|GO:0006355
Mtr2g1337 411 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 23 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1337 Mtr-Chr2 14539901 14543100 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1337 mTERF 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1337 K15032 - gmx:102663414 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1337 2 14539901 14543100 Mtr2g1337 2 14539901 14543100 ECH