Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1336 ATGTTGAACAAATGGTTTCTCTCCCAGAATGTTGTTTTAGGTCTCATCACAACAAAAACAACAACCTCAAAATTCAACAACCCTCTTTTCAACCAACACTTCTCATTCCCATTTTCACTCACAAGATTCTGCACCACAACATCTCAATCTGAATCAGTCACACATCCATTCGCTGCATCTTATCTCATCAACAATTTTGGGTTCTCACATGAATCTGCTCTCAAAGCTTTCAACCTCAAGCAAGTTCGTTTCAATACCGCAGATAAACCTGATTCAGTCATCACCTTCTTTCAAAATCATGGCTTTTCACACGACAACATACGCATCATGATCAGAAGAGCACCATGGTTACTTTCATCACAACCCCACAAAAGGTTTTTGCCAAAGTTTCAATTTTTTCTATCCAATGCTGCTTCTTCCTCTGATATTGTTCCATTGTTAACTACAAACCCTAGAATTTTACGAAGTAGCCTGGACTTGGAGAAACAAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTGAAAACCAACAAGGATATCATTCTTTGCTTAATTCGATATTGGACTGCATTTGCTACTAATCCCTATCACCTTATTGTGTCTAATATCAATTTGATGTCTGATTTTGGAGTTTCTGATAATGTTATTGGTAGTTTGCTTCAGTCAAGGCCGTCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGATTTAGGGTTTCATCCTTCAATGACTAATTTTGGGACTGCTTTGATGGCCAAGAAATGTATGAGTAAAAAACTTTGGGATGAGAAAATTGATACCTTTAAGAAATGGGGTTGGTCTGATGAGGCTATTATTCGAGCATTTAGATGTCGGCCTGAATTGTTGTTGGCTTCAATTGATAAGATTAATTTGGTGATGAGTTTCTGGGTCAACCAATTGGGTTGGAATTCCTTGGCACTTACTAAAAGGCCACATATTTTTAGTTACAGTTTGGATAAAAGGATCACTCCAAGGGCCTCAGTTTTGCAATTTCTTTTAATGAAAGGTTTGCAAAAAAAGAATGCTAGCTTAGTTACACCTTTGAGTTATTCTGAAAATTTGTTTTTGCAGAAGTTTGTTTTCAGCTTTAAGGTGGACTCCGATTATCTATTAAAGTTATACGAGGAAACAATGAAAATTGCATACCCAATGGAAAACAATGGCATGCCATTCACTAATTAG 1221 0.3628 MLNKWFLSQNVVLGLITTKTTTSKFNNPLFNQHFSFPFSLTRFCTTTSQSESVTHPFAASYLINNFGFSHESALKAFNLKQVRFNTADKPDSVITFFQNHGFSHDNIRIMIRRAPWLLSSQPHKRFLPKFQFFLSNAASSSDIVPLLTTNPRILRSSLDLEKQIIPLFELLSRFLKTNKDIILCLIRYWTAFATNPYHLIVSNINLMSDFGVSDNVIGSLLQSRPSIFGSKDLIKSLEEVKDLGFHPSMTNFGTALMAKKCMSKKLWDEKIDTFKKWGWSDEAIIRAFRCRPELLLASIDKINLVMSFWVNQLGWNSLALTKRPHIFSYSLDKRITPRASVLQFLLMKGLQKKNASLVTPLSYSENLFLQKFVFSFKVDSDYLLKLYEETMKIAYPMENNGMPFTN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1336 406 PANTHER CGI-12 PROTEIN-RELATED 14 396 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 Gene3D Transcription termination factor 3, mitochondrial 61 157 IPR038538 -
Mtr2g1336 406 Gene3D Transcription termination factor 3, mitochondrial 158 379 IPR038538 -
Mtr2g1336 406 SMART mt_12 144 177 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 SMART mt_12 218 246 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 396 - -
Mtr2g1336 406 Pfam mTERF 263 368 IPR003690 GO:0003690|GO:0006355
Mtr2g1336 406 Pfam mTERF 95 228 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1336 Mtr-Chr2 14534654 14538239 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1336 mTERF 1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1336 K15032 - gmx:102663414 331.257